RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 C4orf36Q96KX1 117 aa6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 LRRC3BQ96PB8 259 aa6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 ZNF2Q9BSG1 426 aaPredicted RBP6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 URM1Q9BTM9 101 aaKnown RBP6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 DPH1Q9BZG8 443 aa6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 LPAR2Q9HBW0 351 aa6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 HINT3Q9NQE9 182 aaKnown RBP6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 SLC23A2Q9UGH3 650 aa6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 KCNG2Q9UJ96 466 aa6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 OR52A1Q9UKL2 312 aa6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 SLCO1B1Q9Y6L6 691 aa6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 PTPRSQ13332 1948 aa6.78□□□□□ -1.32
TRIM49B-202ENST00000622138 PRAMEF26H0Y7S4 382 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 K7EP13 123 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 TAAR5O14804 337 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 FRS3O43559 492 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 LINC00271P0C7V0 271 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF888P0CJ79 500 aaPredicted RBP6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 LYL1P12980 280 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 PSMB6P28072 239 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 ACVR1BP36896 505 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 PPICP45877 212 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 GPR1P46091 355 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 CLDN12P56749 244 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 ACTBP60709 375 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 ACTG1P63261 375 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 DUSP2Q05923 314 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 TRA2AQ13595 282 aaKnown RBP eCLIP6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 PDZD11Q5EBL8 140 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 LEMD1Q68G75 181 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF585AQ6P3V2 769 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 UNQ9370/PRO34162Q6UXP9 181 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF620Q6ZNG0 422 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 TMED4Q7Z7H5 227 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 OR2L3Q8NG85 312 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 KLK6Q92876 244 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 ZBTB8AQ96BR9 441 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 CMBLQ96DG6 245 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 MACROD1Q9BQ69 325 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 CHST6Q9GZX3 395 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 RAB33BQ9H082 229 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 SMDT1Q9H4I9 107 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 SEPSECSQ9HD40 501 aaKnown RBP6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 GPR173Q9NS66 373 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 TRPC4Q9UBN4 977 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 GRHPRQ9UBQ7 328 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 OR5V1Q9UGF6 321 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 CSAG2Q9Y5P2 127 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 KCNE3Q9Y6H6 103 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 HEATR5BQ9P2D3 2071 aa6.77□□□□□ -1.33
TRIM49B-202ENST00000622138 A0A1W2PPV9 198 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 GLOD5A6NK44 160 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 SLC22A31A6NKX4 558 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 HIDE1A8MVS5 230 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 EIF1AYO14602 144 aaKnown RBP6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 P2RX6O15547 441 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 NDUFS4O43181 175 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 SIAH2O43255 324 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 TCF21O43680 179 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 TBX19O60806 448 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 CA11O75493 328 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 IL2RAP01589 272 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 CISD3P0C7P0 127 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 SNCAP37840 140 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 EIF1AXP47813 144 aaKnown RBP6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 CYCSP99999 105 aaKnown RBP6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 REEP5Q00765 189 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 CDK5R1Q15078 307 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 ELOBQ15370 118 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 GUK1Q16774 197 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 NCR3LG1Q68D85 454 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 STEAP1BQ6NZ63 245 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 ZNF793Q6ZN11 406 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 Q6ZRG5 221 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 TTLL10Q6ZVT0 673 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 LYG2Q86SG7 212 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 GCNT2Q8N0V5 402 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 OR5T1Q8NG75 326 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 OR2T33Q8NG76 320 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 OR10H4Q8NGA5 316 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 OR13C5Q8NGS8 318 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 OR2L2Q8NH16 312 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 OR4C6Q8NH72 309 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 RNASE8Q8TDE3 154 aaKnown RBP6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 SLC41A3Q96GZ6 507 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 SLC35G5Q96KT7 338 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 PRAP1Q96NZ9 151 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 DEFB118Q96PH6 123 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 AQP10Q96PS8 301 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 INTS14Q96SY0 518 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 INSM2Q96T92 566 aaPredicted RBP6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 CNN2Q99439 309 aaKnown RBP6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 MENTQ9BUN1 341 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 C20orf24Q9BUV8 137 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 NMES1Q9C002 83 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 OR8D2Q9GZM6 311 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 GLIPR2Q9H4G4 154 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 NEUROD4Q9HD90 331 aa6.76□□□□□ -1.33
TRIM49B-202ENST00000622138 CBLN4Q9NTU7 201 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms