RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 LRRC25Q8N386 305 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM106AQ96A25 262 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TAAR9Q96RI9 348 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 PLEKHA3Q9HB20 300 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SIRT4Q9Y6E7 314 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 BRWD1Q9NSI6 2320 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 NDUFS1P28331 727 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 CD200P41217 278 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 GPR137CQ8N3F9 429 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TP53RKQ96S44 253 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SLC25A21Q9BQT8 299 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 C1QTNF3Q9BXJ4 246 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 SEC16AO15027 2179 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 C4AP0C0L4 1744 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 C4BP0C0L5 1744 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TLX3O43711 291 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 GNG7O60262 68 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 CTSLP07711 333 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 GSTP1P09211 210 aaKnown RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF865P0CJ78 1059 aaPredicted RBP4.6□□□□□ -1.67
VPS13D-214ENST00000620676 FHITP49789 147 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 TRA2AQ13595 282 aaKnown RBP eCLIP4.6□□□□□ -1.673e-6■□□□□ 8.6
VPS13D-214ENST00000620676 C7orf61Q8IZ16 206 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF461Q8TAF7 563 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 ST6GALNAC6Q969X2 333 aa4.6□□□□□ -1.67
VPS13D-214ENST00000620676 GABARAPH6UMI1 98 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 SHC2P98077 582 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 IRAK1BP1Q5VVH5 260 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 HDAC8Q9BY41 377 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 ESRP2Q9H6T0 727 aaKnown RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 COL1A2P08123 1366 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 GABRA1P14867 456 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 ABOP16442 354 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 BLVRBP30043 206 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 RBM11P57052 281 aaKnown RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 ARSJQ5FYB0 599 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 SHISA6Q6ZSJ9 500 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 PCBD2Q9H0N5 130 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 CDC14CA4D256 554 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 NPIPB15A6NHN6 443 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 GFYI3L273 518 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 TACR3P29371 465 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 PSMB3P49720 205 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 KCTD18Q6PI47 426 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 BRICD5Q6PL45 260 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 DEGS2Q6QHC5 323 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 TAS1R1Q7RTX1 841 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 HSD17B13Q7Z5P4 300 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 STRAPQ9Y3F4 350 aaKnown RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 DLG5Q8TDM6 1919 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 TCRBV5S1A1TA0A578 114 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 NDUFB2O95178 105 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 SUCLG1P53597 346 aaKnown RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 ZP1P60852 638 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 CALHM3Q86XJ0 350 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 Q96M85 177 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 TEAD3Q99594 435 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 SERTAD3Q9UJW9 196 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 GPR55Q9Y2T6 319 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 PLSCR5A0PG75 271 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 OR52A4PA6NMU1 304 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 UGDHO60701 494 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 TBX6O95947 436 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 HIST1H1CP16403 213 aaKnown RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 BAXQ07812 192 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 KHDC3LQ587J8 217 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 LEMD1Q68G75 181 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 ARHGDIGQ99819 225 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM202A6NGA9 273 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 IFITM5A6NNB3 132 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM183BQ1AE95 376 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 ZNF542PQ5EBM4 170 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 APH1AQ96BI3 265 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 OR5B2Q96R09 309 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 LPAR3Q9UBY5 353 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 MMABQ96EY8 250 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 C1QL1O75973 258 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 CRYAAP02489 173 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 AADACP22760 399 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 ZXDAP98168 799 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM115Q12893 351 aaPredicted RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 Q499Y3 187 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 ARL6IP6Q8N6S5 226 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 RAB7BQ96AH8 199 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 PLD4Q96BZ4 506 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 BAZ2AQ9UIF9 1905 aaKnown RBP4.59□□□□□ -1.67
VPS13D-214ENST00000620676 TMEM269A0A1B0GVZ9 245 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 PQLC2LA1A4F0 135 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 LMAN2Q12907 356 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 DECR1Q16698 335 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 GLIPR1L1Q6UWM5 242 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 C16orf82Q7Z2V1 217 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 OR52R1Q8NGF1 315 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 HIST1H2BAQ96A08 127 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 Q9N2J8 555 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 USP3Q9Y6I4 520 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 CCDC88AQ3V6T2 1871 aa4.59□□□□□ -1.67
VPS13D-214ENST00000620676 ADAP1O75689 374 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM255AQ5JRV8 349 aa4.59□□□□□ -1.68
VPS13D-214ENST00000620676 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms