RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 GLYATL1Q969I3 302 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 UBE2E3Q969T4 207 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 CDC6Q99741 560 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 OR2AG1Q9H205 316 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 KCNG2Q9UJ96 466 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 HS3ST2Q9Y278 367 aa9.37□□□□□ -0.91
VPS11-207ENST00000620429 NOP16Q9Y3C1 178 aaKnown RBP9.37□□□□□ -0.91
VPS11-207ENST00000620429 A0A0U1RQV5 110 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 CCSO14618 274 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 TGOLN2O43493 480 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 FRS3O43559 492 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 DFFBO76075 338 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 CD1AP06126 327 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 AQP2P41181 271 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 RABIFP47224 123 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 RPS11P62280 158 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS11-207ENST00000620429 ELOBQ15370 118 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 PRRT3Q5FWE3 981 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 RPTNQ6XPR3 784 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 TMED4Q7Z7H5 227 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 BIVMQ86UB2 503 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 ZBTB8AQ96BR9 441 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 SHDQ96IW2 340 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 NKX2-4Q9H2Z4 354 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 PLEKHA2Q9HB19 425 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 LPAR2Q9HBW0 351 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 CPSF4LA6NMK7 179 aaKnown RBP9.36□□□□□ -0.91
VPS11-207ENST00000620429 J3QLW9 94 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 TCF21O43680 179 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 SLC2A10O95528 541 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 OPN1LWP04000 364 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 OR5AC1P0C628 307 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 OR8U9P0C7N5 309 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 GTF2F2P13984 249 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 ZNF19P17023 458 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 SRMP19623 302 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 PTGER1P34995 402 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 IGFALSP35858 605 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 PPICP45877 212 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 HERPUD1Q15011 391 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 GRASPQ7Z6J2 395 aaPredicted RBP9.36□□□□□ -0.91
VPS11-207ENST00000620429 ADIPOR2Q86V24 386 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 OR10H4Q8NGA5 316 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 OR8U1Q8NH10 309 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 MRGPRDQ8TDS7 321 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 DCUN1D4Q92564 292 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 SMIM19Q96E16 107 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 PPP1R16AQ96I34 528 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 IL17FQ96PD4 163 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 OR14A2Q96R54 314 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 URM1Q9BTM9 101 aaKnown RBP9.36□□□□□ -0.91
VPS11-207ENST00000620429 CBLN4Q9NTU7 201 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 ZCCHC3Q9NUD5 404 aaKnown RBP9.36□□□□□ -0.91
VPS11-207ENST00000620429 SLC25A13Q9UJS0 675 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 PITPNC1Q9UKF7 332 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 CSAG2Q9Y5P2 127 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 MMP24Q9Y5R2 645 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 XIRP2A4UGR9 3374 aa9.36□□□□□ -0.91
VPS11-207ENST00000620429 A0A087WWC5 75 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 SIAH2O43255 324 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 TRGC1P0CF51 173 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 SNCAP37840 140 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 OR12D2P58182 307 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 MESP2Q0VG99 397 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 NCR3LG1Q68D85 454 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 ZNF585AQ6P3V2 769 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 TMPPEQ6ZT21 453 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 IRF7Q92985 503 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 RCC1LQ96I51 464 aaKnown RBP9.35□□□□□ -0.91
VPS11-207ENST00000620429 DIRC2Q96SL1 478 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 FAM83CQ9BQN1 747 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 POTEKPQ9BYX7 375 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 MYOTQ9UBF9 498 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 KIF26AQ9ULI4 1882 aaPredicted RBP9.35□□□□□ -0.91
VPS11-207ENST00000620429 CDHR4A6H8M9 788 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 K7EP13 123 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 GRM6O15303 877 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 LRP3O75074 770 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 CXCL1P09341 107 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 ZNF888P0CJ79 500 aaPredicted RBP9.35□□□□□ -0.91
VPS11-207ENST00000620429 AKT2P31751 481 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 GALNSP34059 522 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 GPR4P46093 362 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 NPY4RP50391 375 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 IDH3GP51553 393 aaPredicted RBP9.35□□□□□ -0.91
VPS11-207ENST00000620429 ZNF85Q03923 595 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 NUMA1Q14980 2115 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 DUSP5Q16690 384 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 GUK1Q16774 197 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 PRAMEF14Q5SWL7 426 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 STPG1Q5TH74 334 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 STEAP1BQ6NZ63 245 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 SMIM15Q7Z3B0 74 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 MRPL43Q8N983 215 aaKnown RBP9.35□□□□□ -0.91
VPS11-207ENST00000620429 ZSCAN4Q8NAM6 433 aaPredicted RBP9.35□□□□□ -0.91
VPS11-207ENST00000620429 CLEC1AQ8NC01 280 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 ZCCHC10Q8TBK6 192 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 ABHD5Q8WTS1 349 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 Q8WTZ3 238 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 KLK6Q92876 244 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms