RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 MRM2Q9UI43 246 aaKnown RBP7.02□□□□□ -1.29
CPNE3-209ENST00000620393 POLR1DQ9Y2S0 133 aa7.02□□□□□ -1.29
CPNE3-209ENST00000620393 LSM2Q9Y333 95 aaKnown RBP7.02□□□□□ -1.29
CPNE3-209ENST00000620393 PRR32B1ATL7 298 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 PSMD9O00233 223 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 MYL12BO14950 172 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 MAGEB4O15481 346 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-209ENST00000620393 INMTO95050 263 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 HLA-HP01893 362 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 MT-ND5P03915 603 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 KRT8P05787 483 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 LCKP06239 509 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF32P17041 273 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 PSMB1P20618 241 aaKnown RBP7.01□□□□□ -1.29
CPNE3-209ENST00000620393 CHRNB4P30926 498 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 DCTDP32321 178 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ARR3P36575 388 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 CD79BP40259 229 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 OPRL1P41146 370 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 RPL5P46777 297 aaKnown RBP7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ALDH3B2P48448 385 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ACTA2P62736 377 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 RAB1AP62820 205 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ACTG2P63267 376 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 PSG4Q00888 419 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ACSM1Q08AH1 577 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 FAM27E3Q08E93 113 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 SCRN3Q0VDG4 424 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 BLMHQ13867 455 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 MED22Q15528 200 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 NEDD8Q15843 81 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 SLC25A35Q3KQZ1 300 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 TP53I3Q53FA7 332 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 HIKESHIQ53FT3 197 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ELFN2Q5R3F8 820 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 C1QTNF12Q5T7M4 302 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 SYT6Q5T7P8 510 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-209ENST00000620393 LIPNQ5VXI9 398 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 STAC2Q6ZMT1 411 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 CFAP77Q6ZQR2 320 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 BHLHA15Q7RTS1 189 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF367Q7RTV3 350 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 KRT77Q7Z794 578 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 LUZP2Q86TE4 346 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-209ENST00000620393 RFLNBQ8N5W9 214 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 WDR31Q8NA23 367 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 RELL2Q8NC24 303 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-209ENST00000620393 OR10S1Q8NGN2 331 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 OR52N5Q8NH56 324 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 MUL1Q969V5 352 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 SLAMF6Q96DU3 332 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 CCDC120Q96HB5 630 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 C4orf36Q96KX1 117 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 MGLLQ99685 303 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 MROQ9BYG7 248 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 OR2H1Q9GZK4 316 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 RNF121Q9H920 327 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ISYNA1Q9NPH2 558 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 PNRC2Q9NPJ4 139 aaKnown RBP7.01□□□□□ -1.29
CPNE3-209ENST00000620393 SLC17A5Q9NRA2 495 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 SLCO1C1Q9NYB5 712 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF224Q9NZL3 707 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 IKZF2Q9UKS7 526 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 ZGRF1Q86YA3 2104 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 RP1L1Q8IWN7 2480 aaPredicted RBP7.01□□□□□ -1.29
CPNE3-209ENST00000620393 SHANK1Q9Y566 2161 aa7.01□□□□□ -1.29
CPNE3-209ENST00000620393 KIAA1549Q9HCM3 1950 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 NBEAQ8NFP9 2946 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 ARPC4-TTLL3A0A0A6YYG9 625 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 EEF1E1-BLOC1S5C9J1V9 151 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 E9PI62 339 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 C16orf97H3BN30 126 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 OGG1O15527 345 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 EEF1E1O43324 174 aaKnown RBP7□□□□□ -1.29
CPNE3-209ENST00000620393 SGCEO43556 437 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 SYNGR3O43761 229 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 RAD51DO75771 328 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 UBL3O95164 117 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 ABHD16AO95870 558 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 H2BFMP0C1H6 154 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 CD79AP11912 226 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 PAX7P23759 505 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 IL32P24001 234 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 UQCRFS1P47985 274 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 RIDAP52758 137 aaKnown RBP7□□□□□ -1.29
CPNE3-209ENST00000620393 GBX2P52951 348 aaPredicted RBP7□□□□□ -1.29
CPNE3-209ENST00000620393 UBE2NP61088 152 aaKnown RBP7□□□□□ -1.29
CPNE3-209ENST00000620393 ECH1Q13011 328 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 MRPL28Q13084 256 aaKnown RBP7□□□□□ -1.29
CPNE3-209ENST00000620393 TPBGQ13641 420 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 DOC2BQ14184 412 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 RAB35Q15286 201 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 TAF13Q15543 124 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 TSC22D1Q15714 1073 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 TIGD6Q17RP2 521 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 RSPO1Q2MKA7 263 aaPredicted RBP7□□□□□ -1.29
CPNE3-209ENST00000620393 FBXL19-AS1Q494R0 122 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 ARMCX4Q5H9R4 360 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 PABPC1L2AQ5JQF8 200 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms