RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CHD3Q12873 2000 aaKnown RBP11.13□□□□□ -0.63
MATR3-227ENST00000618441 SMAD7O15105 426 aaKnown RBP11.13□□□□□ -0.63
MATR3-227ENST00000618441 CA11O75493 328 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 GLSO94925 669 aaPredicted RBP11.13□□□□□ -0.63
MATR3-227ENST00000618441 GPANK1O95872 356 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 TRGC1P0CF51 173 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 PGA4P0DJD7 388 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 PGA5P0DJD9 388 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 CD79AP11912 226 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 CDK5R1Q15078 307 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 GGTA1PQ4G0N0 100 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 HSD17B11Q8NBQ5 300 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 ASB11Q8WXH4 323 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 IL17FQ96PD4 163 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 H0YIV9 168 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 VAMP2P63027 116 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 NR0B2Q15466 257 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 HIKESHIQ53FT3 197 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 MESTQ5EB52 335 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 FAM46CQ5VWP2 391 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 LYPLAL1Q5VWZ2 237 aa11.13□□□□□ -0.63
MATR3-227ENST00000618441 LSM5Q9Y4Y9 91 aaKnown RBP11.13□□□□□ -0.63
MATR3-227ENST00000618441 TMEM184BQ9Y519 407 aaPredicted RBP11.13□□□□□ -0.63
MATR3-227ENST00000618441 A0A0A6YYH2 397 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 TMEM202A6NGA9 273 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 A6NJ64 397 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 BHLHE40O14503 412 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 RAMP1O60894 148 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 CTSLP07711 333 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 DPP4P27487 766 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 ZP2Q05996 745 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 TOMM34Q15785 309 aaPredicted RBP11.12□□□□□ -0.63
MATR3-227ENST00000618441 MST1LQ2TV78 715 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 FDX2Q6P4F2 183 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 SLC30A7Q8NEW0 376 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 OR51F2Q8NH61 342 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 TMEM106CQ9BVX2 250 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 HIPK2Q9H2X6 1198 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 UBQLN4Q9NRR5 601 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 STARD10Q9Y365 291 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 TMED7Q9Y3B3 224 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 KCNE3Q9Y6H6 103 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 A8MWP6 167 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 FGF16O43320 207 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 IGLV3-25P01717 112 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 FZD5Q13467 585 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 SLC25A30Q5SVS4 291 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 DMKNQ6E0U4 476 aaPredicted RBP11.12□□□□□ -0.63
MATR3-227ENST00000618441 BTNL3Q6UXE8 466 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 OVCH1Q7RTY7 1134 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 ZNF584Q8IVC4 421 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 FAM169BQ8N8A8 192 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 EXTL1Q92935 676 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 CMKLR1Q99788 373 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 MACROD1Q9BQ69 325 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 C19orf12Q9NSK7 152 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 TRAV1-2A0A0B4J238 106 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 DCDC2BA2VCK2 349 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 A4D1N5 150 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 PIN1P1O15428 100 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 AK1P00568 194 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 KLK2P20151 261 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 CHATP28329 748 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 ZNF345Q14585 488 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 HAGHQ16775 308 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 VWA2Q5GFL6 755 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 DCXRQ7Z4W1 244 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 SLC35G3Q8N808 338 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 ZSCAN4Q8NAM6 433 aaPredicted RBP11.12□□□□□ -0.63
MATR3-227ENST00000618441 ZNF563Q8TA94 476 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 FAM213BQ8TBF2 198 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 SMIM19Q96E16 107 aa11.12□□□□□ -0.63
MATR3-227ENST00000618441 CCNL2Q96S94 520 aaPredicted RBP11.12□□□□□ -0.63
MATR3-227ENST00000618441 NPIPA5A0A0B4J1W7 369 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 HMGN2P05204 90 aaKnown RBP11.11□□□□□ -0.63
MATR3-227ENST00000618441 RPLP1P05386 114 aaKnown RBP11.11□□□□□ -0.63
MATR3-227ENST00000618441 MYOGP15173 224 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 KCNE1P15382 129 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 SLC6A12P48065 614 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 RPS23P62266 143 aaKnown RBP11.11□□□□□ -0.63
MATR3-227ENST00000618441 PPP2CBP62714 309 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 PPP2CAP67775 309 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 XKR4Q5GH76 650 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 GRHL2Q6ISB3 625 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 TMEM173Q86WV6 379 aaPredicted RBP11.11□□□□□ -0.63
MATR3-227ENST00000618441 MCEMP1Q8IX19 187 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 FAM46BQ96A09 425 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 MIB2Q96AX9 1013 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 MVB12AQ96EY5 273 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 MAGEH1Q9H213 219 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 ZNF346Q9UL40 294 aaKnown RBP11.11□□□□□ -0.63
MATR3-227ENST00000618441 MBLAC1A4D2B0 266 aaPredicted RBP11.11□□□□□ -0.63
MATR3-227ENST00000618441 CXCL1P09341 107 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 NDUFS1P28331 727 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 MLF1P58340 268 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 TAS2R19P59542 299 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 HGFACQ04756 655 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 ACSM1Q08AH1 577 aa11.11□□□□□ -0.63
MATR3-227ENST00000618441 ISXQ2M1V0 245 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms