RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 CCDC92Q53HC0 331 aaPredicted RBP21.32■■□□□ 1
PMS1-220ENST00000618056 OTPQ5XKR4 325 aa21.32■■□□□ 1
PMS1-220ENST00000618056 RFPL4BQ6ZWI9 263 aa21.32■■□□□ 1
PMS1-220ENST00000618056 ICA1LQ8NDH6 482 aa21.32■■□□□ 1
PMS1-220ENST00000618056 GJC3Q8NFK1 279 aa21.32■■□□□ 1
PMS1-220ENST00000618056 OR2T33Q8NG76 320 aa21.32■■□□□ 1
PMS1-220ENST00000618056 TPK1Q9H3S4 243 aa21.32■■□□□ 1
PMS1-220ENST00000618056 FN3KQ9H479 309 aa21.32■■□□□ 1
PMS1-220ENST00000618056 TAAR3PQ9P1P4 343 aa21.32■■□□□ 1
PMS1-220ENST00000618056 POLR1DQ9Y2S0 133 aa21.32■■□□□ 1
PMS1-220ENST00000618056 H3BSA7 217 aa21.31■■□□□ 1
PMS1-220ENST00000618056 TFP02787 698 aa21.31■■□□□ 1
PMS1-220ENST00000618056 RIPK1Q13546 671 aa21.31■■□□□ 1
PMS1-220ENST00000618056 MOGQ16653 247 aa21.31■■□□□ 1
PMS1-220ENST00000618056 MEP1BQ16820 701 aa21.31■■□□□ 1
PMS1-220ENST00000618056 NKPD1Q17RQ9 610 aa21.31■■□□□ 1
PMS1-220ENST00000618056 SLC36A3Q495N2 470 aa21.31■■□□□ 1
PMS1-220ENST00000618056 ZNF786Q8N393 782 aa21.31■■□□□ 1
PMS1-220ENST00000618056 OR4Q3Q8NH05 313 aa21.31■■□□□ 1
PMS1-220ENST00000618056 ABHD4Q8TB40 342 aa21.31■■□□□ 1
PMS1-220ENST00000618056 PIMREGQ9BSJ6 248 aa21.31■■□□□ 1
PMS1-220ENST00000618056 TBCCD1Q9NVR7 557 aa21.31■■□□□ 1
PMS1-220ENST00000618056 ARMC1Q9NVT9 282 aa21.31■■□□□ 1
PMS1-220ENST00000618056 PDP1Q9P0J1 537 aaPredicted RBP21.31■■□□□ 1
PMS1-220ENST00000618056 RER1O15258 196 aa21.3■■□□□ 1
PMS1-220ENST00000618056 E2F6O75461 281 aa21.3■■□□□ 1
PMS1-220ENST00000618056 NGFP01138 241 aa21.3■■□□□ 1
PMS1-220ENST00000618056 PPP1CBP62140 327 aa21.3■■□□□ 1
PMS1-220ENST00000618056 TEKQ02763 1124 aa21.3■■□□□ 1
PMS1-220ENST00000618056 MBNL2Q5VZF2 373 aaKnown RBP21.3■■□□□ 1
PMS1-220ENST00000618056 CYB561A3Q8NBI2 242 aa21.3■■□□□ 1
PMS1-220ENST00000618056 SLC37A3Q8NCC5 494 aa21.3■■□□□ 1
PMS1-220ENST00000618056 OR2T4Q8NH00 348 aa21.3■■□□□ 1
PMS1-220ENST00000618056 OR1F12Q8NHA8 337 aa21.3■■□□□ 1
PMS1-220ENST00000618056 SLC25A40Q8TBP6 338 aa21.3■■□□□ 1
PMS1-220ENST00000618056 KLHL21Q9UJP4 597 aa21.3■■□□□ 1
PMS1-220ENST00000618056 ABHD16AO95870 558 aa21.29■■□□□ 1
PMS1-220ENST00000618056 NAT2P11245 290 aa21.29■■□□□ 1
PMS1-220ENST00000618056 TUBG1P23258 451 aa21.29■■□□□ 1
PMS1-220ENST00000618056 GIFP27352 417 aa21.29■■□□□ 1
PMS1-220ENST00000618056 ARHGDIAP52565 204 aa21.29■■□□□ 1
PMS1-220ENST00000618056 DBPQ10586 325 aaPredicted RBP21.29■■□□□ 1
PMS1-220ENST00000618056 ZNF540Q8NDQ6 660 aa21.29■■□□□ 1
PMS1-220ENST00000618056 KLF14Q8TD94 323 aaPredicted RBP21.29■■□□□ 1
PMS1-220ENST00000618056 UBASH3BQ8TF42 649 aa21.29■■□□□ 1
PMS1-220ENST00000618056 SNX33Q8WV41 574 aa21.29■■□□□ 1
PMS1-220ENST00000618056 RBM4Q9BWF3 364 aaKnown RBP21.29■■□□□ 1
PMS1-220ENST00000618056 OR2J1Q9GZK6 312 aa21.29■■□□□ 1
PMS1-220ENST00000618056 TUBG2Q9NRH3 451 aa21.29■■□□□ 1
PMS1-220ENST00000618056 MALRD1Q5VYJ5 2156 aa21.29■■□□□ 1
PMS1-220ENST00000618056 ATP6V1G2O95670 118 aa21.28■■□□□ 1
PMS1-220ENST00000618056 GCH1P30793 250 aa21.28■■□□□ 1
PMS1-220ENST00000618056 NR4A2P43354 598 aa21.28■■□□□ 1
PMS1-220ENST00000618056 ERFP50548 548 aa21.28■■□□□ 1
PMS1-220ENST00000618056 SNCBQ16143 134 aa21.28■■□□□ 1
PMS1-220ENST00000618056 SPATA46Q5T0L3 261 aa21.28■■□□□ 1
PMS1-220ENST00000618056 TEX47Q8TBZ9 253 aa21.28■■□□□ 1
PMS1-220ENST00000618056 NMNAT2Q9BZQ4 307 aa21.28■■□□□ 1
PMS1-220ENST00000618056 HDHD2Q9H0R4 259 aa21.28■■□□□ 1
PMS1-220ENST00000618056 HINT3Q9NQE9 182 aaKnown RBP21.28■■□□□ 1
PMS1-220ENST00000618056 KCNG2Q9UJ96 466 aa21.28■■□□□ 1
PMS1-220ENST00000618056 C17orf100A8MU93 164 aa21.27■■□□□ 1
PMS1-220ENST00000618056 J3QW42 95 aa21.27■■□□□ 1
PMS1-220ENST00000618056 USF1P22415 310 aaPredicted RBP21.27■■□□□ 1
PMS1-220ENST00000618056 GGT2P36268 569 aa21.27■■□□□ 1
PMS1-220ENST00000618056 MPV17P39210 176 aa21.27■■□□□ 1
PMS1-220ENST00000618056 CARTPTQ16568 116 aa21.27■■□□□ 1
PMS1-220ENST00000618056 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.27■■□□□ 1
PMS1-220ENST00000618056 PROKR2Q8NFJ6 384 aa21.27■■□□□ 1
PMS1-220ENST00000618056 IPCEF1Q8WWN9 437 aaPredicted RBP21.27■■□□□ 1
PMS1-220ENST00000618056 SLC7A6Q92536 515 aa21.27■■□□□ 1
PMS1-220ENST00000618056 NRBF2Q96F24 287 aa21.27■■□□□ 1
PMS1-220ENST00000618056 DCLRE1CQ96SD1 692 aaKnown RBP21.27■■□□□ 1
PMS1-220ENST00000618056 COQ7Q99807 217 aa21.27■■□□□ 1
PMS1-220ENST00000618056 CMC2Q9NRP2 79 aa21.27■■□□□ 1
PMS1-220ENST00000618056 MRPL22Q9NWU5 206 aaKnown RBP21.27■■□□□ 1
PMS1-220ENST00000618056 NKIRAS2Q9NYR9 191 aa21.27■■□□□ 1
PMS1-220ENST00000618056 CYB5R1Q9UHQ9 305 aa21.27■■□□□ 1
PMS1-220ENST00000618056 DEAF1O75398 565 aaPredicted RBP21.26■□□□□ 0.99
PMS1-220ENST00000618056 HLA-DQA2P01906 255 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 MT-ND5P03915 603 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 ANXA8P13928 327 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 SLC25A1P53007 311 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 CRMP1Q14194 572 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 ALKBH6Q3KRA9 238 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 ELFN2Q5R3F8 820 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 SLC18B1Q6NT16 456 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 CORO6Q6QEF8 472 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 HS3ST5Q8IZT8 346 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 ZNF556Q9HAH1 456 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 NTN4Q9HB63 628 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 GRIP1Q9Y3R0 1128 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 JMJD1CQ15652 2540 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 ABCA2Q9BZC7 2435 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 H3BN98 237 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 IFNGP01579 166 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 HPXP02790 462 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 PYCR1P32322 319 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 GRK5P34947 590 aa21.26■□□□□ 0.99
PMS1-220ENST00000618056 MRPS11P82912 194 aaKnown RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms