RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 C1orf159Q96HA4 380 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 TEX37Q96LM6 180 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 OR5B2Q96R09 309 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 SSX3Q99909 188 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 NAA11Q9BSU3 229 aaPredicted RBP7.48□□□□□ -1.21
GPC6-202ENST00000617456 TMED9Q9BVK6 235 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 MND1Q9BWT6 205 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 PLA2G12AQ9BZM1 189 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 ADAM19Q9H013 955 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 SLC38A1Q9H2H9 487 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 P2RX2Q9UBL9 471 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 PCDHGB1Q9Y5G3 927 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 PUS1Q9Y606 427 aaKnown RBP eCLIP7.48□□□□□ -1.21
GPC6-202ENST00000617456 ATP23Q9Y6H3 246 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 V9GYQ6 96 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 MGAM2Q2M2H8 2515 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 DSPPQ9NZW4 1301 aa7.48□□□□□ -1.21
GPC6-202ENST00000617456 A0A1W2PNR3 127 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 A0A1W2PR80 420 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 PRAMEF27A3QJZ7 478 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 CDHR4A6H8M9 788 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 OR5H1A6NKK0 313 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 M0QZK8 103 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 M0R1B8 84 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 SPRY1O43609 319 aaPredicted RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 MRPL33O75394 65 aaKnown RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 SCO1O75880 301 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 SNRNP70P08621 437 aaKnown RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 CSF3P09919 207 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 ACSM4P0C7M7 580 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 RRASP10301 218 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 GGT1P19440 569 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 IGHV1-2P23083 117 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 EDNRAP25101 427 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 EPHA3P29320 983 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 CRISP3P54108 245 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 TGFBR3Q03167 851 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 HSF2Q03933 536 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 PUDPQ08623 228 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 PIN1Q13526 163 aaPredicted RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 LARS2Q15031 903 aaKnown RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 TRIP10Q15642 601 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 GRK1Q15835 563 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 KCNMB1Q16558 191 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 MICAQ29983 383 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 TNFAIP8L2Q6P589 184 aaPredicted RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 PAQR6Q6TCH4 344 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 C12orf54Q6X4T0 127 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 B3GLCTQ6Y288 498 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 REC114Q7Z4M0 266 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 ZNF100Q8IYN0 542 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 ZNF433Q8N7K0 673 aaPredicted RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 OR52N5Q8NH56 324 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 AKR7LQ8NHP1 331 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 LIPHQ8WWY8 451 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 RAB8BQ92930 207 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 TMEM45BQ96B21 275 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 APH1AQ96BI3 265 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 ZNF524Q96C55 264 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 R3HDM4Q96D70 268 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 MSI2Q96DH6 328 aaKnown RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 ITCHQ96J02 903 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 CNBD2Q96M20 576 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 MUS81Q96NY9 551 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 ZNF385AQ96PM9 386 aaKnown RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 ZNF300Q96RE9 604 aaPredicted RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 ATP6V0BQ99437 205 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 COPS4Q9BT78 406 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 C1QTNF6Q9BXI9 259 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 EVA1AQ9H8M9 152 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 TPT1P8Q9HAU6 139 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 BCL2L10Q9HD36 194 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 NANSQ9NR45 359 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 CTPS2Q9NRF8 586 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 ASB6Q9NWX5 421 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 TAS2R16Q9NYV7 291 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 ELF5Q9UKW6 265 aaPredicted RBP7.47□□□□□ -1.21
GPC6-202ENST00000617456 SLC9A8Q9Y2E8 581 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 PCDHGB5Q9Y5G0 923 aa7.47□□□□□ -1.21
GPC6-202ENST00000617456 CENPVL1A0A0U1RR11 272 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 A0A1B0GV90 55 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 CIB4A0PJX0 185 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 I3L521 148 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 UBDO15205 165 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 FZD7O75084 574 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 RAD51DO75771 328 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 CYP7B1O75881 506 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 ZFPL1O95159 310 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 TGFAP01135 160 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 IGHV3-9P01782 118 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 GPIP06744 558 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 HCKP08631 526 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 ZNF250P15622 560 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 PPIBP23284 216 aaKnown RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 CD40P25942 277 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 OPRL1P41146 370 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 IDH2P48735 452 aaKnown RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 PDLIM4P50479 330 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 EFNA4P52798 201 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 MVDP53602 400 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms