RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CYB5R1Q9UHQ9 305 aa6.9□□□□□ -1.31
NEK3-207ENST00000617054 P2RY10O00398 339 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 LRP3O75074 770 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 SP1P08047 785 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 H2BFMP0C1H6 154 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 PTHLHP12272 177 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 RANBP1P43487 201 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 RAC3P60763 192 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 CSNK2A1P68400 391 aaPredicted RBP6.89□□□□□ -1.31
NEK3-207ENST00000617054 OXA1LQ15070 435 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 YIF1BQ5BJH7 314 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 KCTD18Q6PI47 426 aaPredicted RBP6.89□□□□□ -1.31
NEK3-207ENST00000617054 LINC00299Q6ZSB3 139 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 KCTD20Q7Z5Y7 419 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 RNF128Q8TEB7 428 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 MRPL48Q96GC5 212 aaKnown RBP6.89□□□□□ -1.31
NEK3-207ENST00000617054 NEDD4LQ96PU5 975 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 CITED4Q96RK1 184 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 ZNF416Q9BWM5 594 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 SRRQ9GZT4 340 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 FANCFQ9NPI8 374 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 EXTL2Q9UBQ6 330 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 GDF2Q9UK05 429 aaPredicted RBP6.89□□□□□ -1.31
NEK3-207ENST00000617054 BOKQ9UMX3 212 aaPredicted RBP6.89□□□□□ -1.31
NEK3-207ENST00000617054 SLC5A6Q9Y289 635 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 TNRC6AQ8NDV7 1962 aaKnown RBP6.89□□□□□ -1.31
NEK3-207ENST00000617054 IGF2RP11717 2491 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 A0A1W2PQ09 198 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 E9PLN8 166 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 SERPINA3P01011 423 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 ETV6P41212 452 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 CSNK1A1P48729 337 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 EVX1P49640 407 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 PPIAP62937 165 aaKnown RBP6.89□□□□□ -1.31
NEK3-207ENST00000617054 RELBQ01201 579 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 Q499Y3 187 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 ASPHD2Q6ICH7 369 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 JMJD6Q6NYC1 403 aaPredicted RBP6.89□□□□□ -1.31
NEK3-207ENST00000617054 DNM1P34Q6PK57 102 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 SLC25A47Q6Q0C1 308 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 STAC2Q6ZMT1 411 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 TRILQ7L0X0 811 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 PRSS45Q7RTY3 260 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 GLCCI1Q86VQ1 547 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 IL17RDQ8NFM7 739 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 OR4M1Q8NGD0 313 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 COX4I2Q96KJ9 171 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 COMMD4Q9H0A8 199 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 CRLF2Q9HC73 371 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 ABI3Q9P2A4 366 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 ZNF319Q9P2F9 582 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 TBC1D24Q9ULP9 559 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 B3GNT3Q9Y2A9 372 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 OR5H15A6NDH6 313 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 EFSO43281 561 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 LANCL1O43813 399 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 EIF1BO60739 113 aaKnown RBP6.89□□□□□ -1.31
NEK3-207ENST00000617054 ARL6IP5O75915 188 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 CSF3P09919 207 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 IL7P13232 177 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 ZNF12P17014 697 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 ZNF17P17021 662 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 TRAM1Q15629 374 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 TEX30Q5JUR7 227 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 SLC25A25Q6KCM7 469 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 UNQ9370/PRO34162Q6UXP9 181 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 GDPD3Q7L5L3 318 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 LINGO2Q7L985 606 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 OR51A2Q8NGJ7 313 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 ZNF671Q8TAW3 534 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 FNDC9Q8TBE3 224 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 ZFP3Q96NJ6 502 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 SIAEQ9HAT2 523 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 TCF7L1Q9HCS4 588 aa6.89□□□□□ -1.31
NEK3-207ENST00000617054 F5H5K5 113 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 AQP8O94778 261 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 FCER2P06734 321 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 DBHP09172 617 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 LIPCP11150 499 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 CEACAM1P13688 526 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 GALP22466 123 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ROM1Q03395 351 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 RASGEF1BQ0VAM2 473 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 HIST3H3Q16695 136 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 UTS2BQ765I0 119 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 FCRLAQ7L513 359 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 NRARPQ7Z6K4 114 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 Q8N402 240 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 OR2AJ1Q8NGZ0 328 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 OR2V1Q8NHB1 315 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 LGALS14Q8TCE9 139 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 RPS4Y2Q8TD47 263 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 ADGRG7Q96K78 797 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 SNX18Q96RF0 628 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 NAA11Q9BSU3 229 aaPredicted RBP6.88□□□□□ -1.31
NEK3-207ENST00000617054 LIN7BQ9HAP6 207 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 PALMDQ9NP74 551 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 G6PC2Q9NQR9 355 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 KLHL9Q9P2J3 617 aa6.88□□□□□ -1.31
NEK3-207ENST00000617054 OR52A1Q9UKL2 312 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms