RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TRAV34A0A0B4J273 112 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TBL1XO60907 577 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ICOSLGO75144 302 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TRAPPC6AO75865 159 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 HNRNPA2B1P22626 353 aaKnown RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 Q499Y3 187 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM184AQ6ZMB5 413 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 RAB18Q9NP72 206 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 POU2F2P09086 479 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 WNT7BP56706 349 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CTBSQ01459 385 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TRAPPC6BQ86SZ2 158 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 LRRTM4Q86VH4 590 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CBLN4Q9NTU7 201 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CACNA1HO95180 2353 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ASGR2P07307 311 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SLC25A30Q5SVS4 291 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 COX18Q8N8Q8 333 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 OR5AU1Q8NGC0 362 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 OR10AD1Q8NGE0 317 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CXorf40AQ8TE69 158 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ISOC2Q96AB3 205 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 LHX3Q9UBR4 397 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TIMM8BQ9Y5J9 83 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 PTPRFP10586 1907 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 HSPB2A8KAH6 182 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CCL22O00626 93 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 OMGP23515 440 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ARRB1P49407 418 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ACACAQ13085 2346 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 HSPB2Q16082 182 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SLC36A2Q495M3 483 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 LRP11Q86VZ4 500 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 DAZAP1Q96EP5 407 aaKnown RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ST6GALNAC5Q9BVH7 336 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 KIF26AQ9ULI4 1882 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 PRAMEF11O60813 436 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 GPR37L1O60883 481 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TNFSF15O95150 251 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 AKR1A1P14550 325 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SNRPD1P62314 119 aaKnown RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CLDN10P78369 228 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 DHODHQ02127 395 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 UBE2V1Q13404 147 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 COMMD6Q7Z4G1 85 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 OR5A2Q8NGI9 324 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 EMG1Q92979 244 aaKnown RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM38AQ9H6F2 299 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 PPP1R3EQ9H7J1 279 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 MAP1LC3B2A6NCE7 125 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 OR51F1A6NGY5 319 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 PDHXO00330 501 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM267Q0VDI3 215 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SLC8B1Q6J4K2 584 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF343Q6P1L6 599 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SLC24A5Q71RS6 500 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ZDHHC22Q8N966 263 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 OR5D14Q8NGL3 314 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM169Q96HH4 297 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 MAP1LC3BQ9GZQ8 125 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 A0A1W2PPV4 95 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CHRM2P08172 466 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 PYCR3Q53H96 274 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 RAB6CQ53S08 254 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 VSIG10LQ86VR7 867 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 FAM86B1Q8N7N1 296 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 FAM103A1Q9BTL3 118 aaKnown RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 RSG1Q9BU20 258 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 RAB6CQ9H0N0 254 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 NOX4Q9NPH5 578 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 DHCR7Q9UBM7 475 aaKnown RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SNED1Q8TER0 1413 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 H3BQ15 152 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 DNPH1O43598 174 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 PPP1CBP62140 327 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SLC35D3Q5M8T2 416 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 THOC6Q86W42 341 aaKnown RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 OR5B3Q8NH48 314 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 IFITM5A6NNB3 132 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 PRRG1O14668 218 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SEMA4FO95754 770 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 HLA-DQB2P05538 268 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 OPRD1P41143 372 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 MMP16P51512 607 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ITPRIPL2Q3MIP1 535 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 KCNG3Q8TAE7 436 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 C14orf144Q96I85 54 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 PMCHL2Q9BQD1 86 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SERTAD4Q9NUC0 356 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 ASIC5Q9NY37 505 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 TNS1Q9HBL0 1735 aaKnown RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 SULT2B1O00204 365 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 IGF2P01344 180 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 IRF3Q14653 427 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 Q6ZPB1 254 aaPredicted RBP4.54□□□□□ -1.68
VPS13D-213ENST00000613099 CATSPERDQ86XM0 798 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 LGI3Q8N145 548 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 OR6N2Q8NGY6 317 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 NTNG2Q96CW9 530 aa4.54□□□□□ -1.68
VPS13D-213ENST00000613099 NMES1Q9C002 83 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms