RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 INTS12Q96CB8 462 aaKnown RBP9.81□□□□□ -0.84
FAM3A-221ENST00000612856 TRIB1Q96RU8 372 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 MED18Q9BUE0 208 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 PCED1AQ9H1Q7 454 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 CCDC86Q9H6F5 360 aaKnown RBP9.81□□□□□ -0.84
FAM3A-221ENST00000612856 RPS10P5Q9NQ39 176 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 TRANK1O15050 2925 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 TMEM72A0PK05 275 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 SLC2A10O95528 541 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 OR8G3PP0DMU2 310 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 FAUP35544 74 aaKnown RBP9.81□□□□□ -0.84
FAM3A-221ENST00000612856 PPT1P50897 306 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 OR2B8PP59922 312 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 RASGEF1BQ0VAM2 473 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 FAM76BQ5HYJ3 339 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 GDF7Q7Z4P5 450 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 ZAR1Q86SH2 424 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 NAA40Q86UY6 237 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 SHISA5Q8N114 240 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 PRR18Q8N4B5 295 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 BBS1Q8NFJ9 593 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 OR5W2Q8NH69 310 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 ENKD1Q9H0I2 346 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 FBXO4Q9UKT5 387 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 TCFL5Q9UL49 500 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 LGI1O95970 557 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 IFNA6P05013 189 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 PNMTP11086 282 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 TEAD1P28347 426 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 DLX5P56178 289 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 PMP22Q01453 160 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 SLC10A1Q14973 349 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 AGERQ15109 404 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 PEA15Q15121 130 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 OR1C1Q15619 314 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 ADAM5Q6NVV9 412 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 GALNT16Q8N428 558 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 CISD2Q8N5K1 135 aaKnown RBP9.81□□□□□ -0.84
FAM3A-221ENST00000612856 SCMH1Q96GD3 660 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 ASIC5Q9NY37 505 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 DNAJB11Q9UBS4 358 aa9.81□□□□□ -0.84
FAM3A-221ENST00000612856 NOSIPQ9Y314 301 aaKnown RBP9.81□□□□□ -0.84
FAM3A-221ENST00000612856 POLQO75417 2590 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 A0A087WUU8 490 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 HSPA12AO43301 675 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 GTF2F2P13984 249 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 PGAM2P15259 253 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 BMP5P22003 454 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 RAB2AP61019 212 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 PRTGQ2VWP7 1150 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 PLA1AQ53H76 456 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 CYB5R2Q6BCY4 276 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 RBMS3Q6XE24 437 aaKnown RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 OVCH1Q7RTY7 1134 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 LRRTM1Q86UE6 522 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF440Q8IYI8 595 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 HEXA-AS1Q9H8Q6 139 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 CA10Q9NS85 328 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 A0A0A6YYD5 115 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 MFSD2BA6NFX1 497 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 GGT3PA6NGU5 568 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 SC5DO75845 299 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF432O94892 652 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 TXNDC12O95881 172 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 MT-ND5P03915 603 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 CALCBP10092 127 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 NID1P14543 1247 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 IFNGR1P15260 489 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 ART1P52961 327 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 SNRPGP62308 76 aaKnown RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 CTAG1AP78358 180 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 KCTD18Q6PI47 426 aaPredicted RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 FCRLAQ7L513 359 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 WDR5BQ86VZ2 330 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 TMPRSS12Q86WS5 348 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 OR52I2Q8NH67 350 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 LGALS14Q8TCE9 139 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 C14orf79Q96F83 325 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 S100A16Q96FQ6 103 aaKnown RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 ALKBH3Q96Q83 286 aaPredicted RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 WWTR1Q9GZV5 400 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 ZNF350Q9GZX5 532 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 GPATCH2Q9NW75 528 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 DTX4Q9Y2E6 619 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 TP53BP1Q12888 1972 aaPredicted RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 MCRIP1C9JLW8 97 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 ATXN7O15265 892 aaPredicted RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 PIPP12273 146 aaPredicted RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 PPICP45877 212 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 SLC26A5P58743 744 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 AIMP2Q13155 320 aaKnown RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 EIF2B1Q14232 305 aaKnown RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 EXT1Q16394 746 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 OCLNQ16625 522 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 PCGF3Q3KNV8 242 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 UBE3DQ7Z6J8 389 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 MAFIPQ8WZ33 124 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 WDR89Q96FK6 387 aaPredicted RBP9.8□□□□□ -0.84
FAM3A-221ENST00000612856 RSRP1Q9BUV0 290 aa9.8□□□□□ -0.84
FAM3A-221ENST00000612856 BABAM2Q9NXR7 383 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms