RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 OR13C9Q8NGT0 318 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 OR6K3Q8NGY3 331 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 PCDH15Q96QU1 1955 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 FAM186AA6NE01 2351 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 MPTX1A8MV57 137 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 HTR3BO95264 441 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 SERTAD2Q14140 314 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 PDSS1Q5T2R2 415 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 JMJD6Q6NYC1 403 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-216ENST00000610401 WDFY1Q8IWB7 410 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 ZNF679Q8IYX0 411 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 ZNF615Q8N8J6 731 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 INO80EQ8NBZ0 244 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-216ENST00000610401 DCUN1D4Q92564 292 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 SOX7Q9BT81 388 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 TPSD1Q9BZJ3 242 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 SLC6A15Q9H2J7 730 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 BANF2Q9H503 90 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 ABCA7Q8IZY2 2146 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 CNR1P21554 472 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 MARCH1Q8TCQ1 289 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 ELP5Q8TE02 316 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 ZNF578Q96N58 590 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-216ENST00000610401 HRH4Q9H3N8 390 aa18.32■□□□□ 0.52
SSBP3-216ENST00000610401 A0A1W2PP11 408 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 OR6C65A6NJZ3 312 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 ADAP1O75689 374 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 CD1CP29017 333 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 NPY4RP50391 375 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 TDGQ13569 410 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 C1orf53Q5VUE5 145 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 C11orf87Q6NUJ2 197 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 HAGHLQ6PII5 290 aaPredicted RBP18.31■□□□□ 0.52
SSBP3-216ENST00000610401 ZNF784Q8NCA9 323 aaPredicted RBP18.31■□□□□ 0.52
SSBP3-216ENST00000610401 NAXEQ8NCW5 288 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 DUSP15Q9H1R2 295 aaPredicted RBP18.31■□□□□ 0.52
SSBP3-216ENST00000610401 GPN3Q9UHW5 284 aaPredicted RBP18.31■□□□□ 0.52
SSBP3-216ENST00000610401 TMEM14AQ9Y6G1 99 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 IGKV1D-43A0A0B4J1Z2 117 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 IGHV5-51A0A0C4DH38 117 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 PRSS37A4D1T9 235 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 PMS2P2O95744 297 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 IFNA6P05013 189 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 CD96P40200 585 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 MANEAQ5SRI9 462 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 HLA-DQA1Q5Y7H0 255 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 OR52N4Q8NGI2 321 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 THAP6Q8TBB0 222 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 NICN1Q9BSH3 213 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 MFRPQ9BY79 579 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 UPB1Q9UBR1 384 aa18.31■□□□□ 0.52
SSBP3-216ENST00000610401 PRRC2CQ9Y520 2896 aaKnown RBP18.31■□□□□ 0.52
SSBP3-216ENST00000610401 F8W036 122 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 ITGB2P05107 769 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 RPA2P15927 270 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 CTHP32929 405 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 SLC25A1P53007 311 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 BLOC1S1P78537 153 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 PTPMT1Q8WUK0 201 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-216ENST00000610401 CNTD2Q9H8S5 307 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 SEC61A2Q9H9S3 476 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 PCOLCE2Q9UKZ9 415 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 OR14I1A6ND48 311 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 MGMTP16455 207 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 CSRP1P21291 193 aaKnown RBP18.3■□□□□ 0.52
SSBP3-216ENST00000610401 SNTB1Q13884 538 aaKnown RBP18.3■□□□□ 0.52
SSBP3-216ENST00000610401 PLEKHN1Q494U1 663 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-216ENST00000610401 CARD17Q5XLA6 110 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 HSD17B13Q7Z5P4 300 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-216ENST00000610401 NAXDQ8IW45 347 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 PUSL1Q8N0Z8 303 aaKnown RBP18.3■□□□□ 0.52
SSBP3-216ENST00000610401 CLRN3Q8NCR9 226 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 SP7Q8TDD2 431 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-216ENST00000610401 RNF222A6NCQ9 220 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 TMEM200CA6NKL6 621 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 BET1O15155 118 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 STK17BO94768 372 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 SEMA4FO95754 770 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 ZNF823P16415 610 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 NFYBP25208 207 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 IKZF1Q13422 519 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 PTCRAQ6ISU1 281 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-216ENST00000610401 C15orf40Q8WUR7 153 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 ARL5BQ96KC2 179 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 RASL12Q9NYN1 266 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 CSAG2Q9Y5P2 127 aa18.3■□□□□ 0.52
SSBP3-216ENST00000610401 SDCBPO00560 298 aaPredicted RBP18.29■□□□□ 0.52
SSBP3-216ENST00000610401 NSDHLQ15738 373 aa18.29■□□□□ 0.52
SSBP3-216ENST00000610401 MUC22E2RYF6 1773 aaPredicted RBP18.29■□□□□ 0.52
SSBP3-216ENST00000610401 EPOPA6NHQ4 379 aa18.29■□□□□ 0.52
SSBP3-216ENST00000610401 ABCD4O14678 606 aa18.29■□□□□ 0.52
SSBP3-216ENST00000610401 ZNF205O95201 554 aa18.29■□□□□ 0.52
SSBP3-216ENST00000610401 CDCP2Q5VXM1 449 aa18.29■□□□□ 0.52
SSBP3-216ENST00000610401 OR5M8Q8NGP6 311 aa18.29■□□□□ 0.52
SSBP3-216ENST00000610401 ZNF208O43345 1280 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 PPIAP62937 165 aaKnown RBP18.28■□□□□ 0.52
SSBP3-216ENST00000610401 DEFB133Q30KQ1 61 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 GTPBP8Q8N3Z3 284 aaPredicted RBP18.28■□□□□ 0.52
SSBP3-216ENST00000610401 CFHR5Q9BXR6 569 aa18.28■□□□□ 0.52
SSBP3-216ENST00000610401 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms