RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 IPCEF1Q8WWN9 437 aaPredicted RBP18.7■□□□□ 0.58
PPFIA3-208ENST00000602726 SLC7A6OSQ96CW6 309 aaPredicted RBP18.7■□□□□ 0.58
PPFIA3-208ENST00000602726 CHODLQ9H9P2 273 aa18.7■□□□□ 0.58
PPFIA3-208ENST00000602726 TBC1D23Q9NUY8 699 aa18.7■□□□□ 0.58
PPFIA3-208ENST00000602726 GRIP1Q9Y3R0 1128 aa18.7■□□□□ 0.58
PPFIA3-208ENST00000602726 PLSCR5A0PG75 271 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 H3BSA7 217 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 BHLHE40O14503 412 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 RER1O15258 196 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 CRLF1O75462 422 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 COL8A2P25067 703 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 CCL8P80075 99 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 GK3PQ14409 553 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 SLC36A3Q495N2 470 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 CCDC92Q53HC0 331 aaPredicted RBP18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 ZBTB46Q86UZ6 589 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 NPEPL1Q8NDH3 523 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 GJC3Q8NFK1 279 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 CANT1Q8WVQ1 401 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 DGCR6LQ9BY27 220 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 PLA2G12AQ9BZM1 189 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 FN3KQ9H479 309 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 TBCCD1Q9NVR7 557 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 NKIRAS2Q9NYR9 191 aa18.69■□□□□ 0.58
PPFIA3-208ENST00000602726 OR6C6A6NF89 314 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 GNGT2O14610 69 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 TPD52L2O43399 206 aaKnown RBP18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 DNAJC8O75937 253 aaPredicted RBP18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 NCR1O76036 304 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 HLA-DQA2P01906 255 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 HOXB6P17509 224 aaKnown RBP18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 ACHEP22303 614 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 ZNF81P51508 661 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 CHN2P52757 468 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 MRPS11P82912 194 aaKnown RBP18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 TEKQ02763 1124 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 DBPQ10586 325 aaPredicted RBP18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 FLOT2Q14254 428 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 SPATA24Q86W54 205 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 SLC26A10Q8NG04 563 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 OR10G2Q8NGC3 310 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 OR8D4Q8NGM9 314 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 SLC7A6Q92536 515 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 CDADC1Q9BWV3 514 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 TSSK6Q9BXA6 273 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 DECR2Q9NUI1 292 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 ATPIF1Q9UII2 106 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 LHFPL6Q9Y693 200 aa18.68■□□□□ 0.58
PPFIA3-208ENST00000602726 LRP5LA4QPB2 252 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 TFP02787 698 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 TACSTD2P09758 323 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 ZNF16P17020 682 aaPredicted RBP18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 TUBG1P23258 451 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 CORO6Q6QEF8 472 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 CYB561A3Q8NBI2 242 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 GIPC3Q8TF64 312 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 GTF3AQ92664 365 aaKnown RBP18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 COG8Q96MW5 612 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 HDHD2Q9H0R4 259 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 TUBG2Q9NRH3 451 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 CYSLTR2Q9NS75 346 aa18.67■□□□□ 0.58
PPFIA3-208ENST00000602726 SPRY3O43610 288 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 LILRA1O75019 489 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 SOX14O95416 240 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 LIPAP38571 399 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 GPR6P46095 362 aaPredicted RBP18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 MMP15P51511 669 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 TMEM33P57088 247 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 HIST1H3AP68431 136 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 COX10Q12887 443 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 TSTQ16762 297 aaKnown RBP18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 HIST2H3PS2Q5TEC6 136 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 HIST2H3AQ71DI3 136 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 LNX2Q8N448 690 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 PROKR2Q8NFJ6 384 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 OR2T33Q8NG76 320 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 OR2T4Q8NH00 348 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 YIPF5Q969M3 257 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 DCLRE1CQ96SD1 692 aaKnown RBP18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 ZNF275Q9NSD4 429 aaPredicted RBP18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 BAIAP2Q9UQB8 552 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 STARD10Q9Y365 291 aa18.66■□□□□ 0.58
PPFIA3-208ENST00000602726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.65■□□□□ 0.582e-6■■■■□ 24
PPFIA3-208ENST00000602726 LOC100289279A0A1B0GTE1 492 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 TIMM8AO60220 97 aaPredicted RBP18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 CDC14BO60729 498 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 DBHP09172 617 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 RGS6P49758 472 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 TRIP10Q15642 601 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 TMEM255AQ5JRV8 349 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 HIPK1Q86Z02 1210 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 LINC00346Q8IVM7 164 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 OR2AJ1Q8NGZ0 328 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 MSI2Q96DH6 328 aaKnown RBP18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 DDOQ99489 341 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 FEVQ99581 238 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 COQ7Q99807 217 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 YY1AP1Q9H869 796 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 ARMC1Q9NVT9 282 aa18.65■□□□□ 0.58
PPFIA3-208ENST00000602726 CGGBP1Q9UFW8 167 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms