RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 MEMO1Q9Y316 297 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 SNX11Q9Y5W9 270 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 PATJQ8NI35 1801 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 EVPLQ92817 2033 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 LTBP4Q8N2S1 1624 aa8.02□□□□□ -1.13
COMMD3-215ENST00000602574 A0A1B0GW15 77 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 AQP7P3A6NL99 342 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 PRR33A8MZF0 331 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 C9JQL5 133 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 C9JVG2 144 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 ARPC3O15145 178 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 WIPF1O43516 503 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 TOX4O94842 621 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 MAOAP21397 527 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 IMPA1P29218 277 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 SNRPD1P62314 119 aaKnown RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 CSNK2A1P68400 391 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 OC90Q02509 493 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 CACNG1Q06432 222 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 TMEM183BQ1AE95 376 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 TNFAIP8L2Q6P589 184 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 MTSS1LQ765P7 747 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 GLT6D1Q7Z4J2 308 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 YRDCQ86U90 279 aaKnown RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 LINC00116Q8NCU8 138 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 CSNK2A3Q8NEV1 391 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 OR5AK2Q8NH90 309 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 SFXN5Q8TD22 340 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 SORCS1Q8WY21 1168 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 EMID1Q96A84 441 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 ZBTB8AQ96BR9 441 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 HINT2Q9BX68 163 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 RAB11FIP5Q9BXF6 653 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 NIF3L1Q9GZT8 377 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 ELL3Q9HB65 397 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 FGF20Q9NP95 211 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 FKBP11Q9NYL4 201 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 COMMD9Q9P000 198 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 TMEM265A0A087WTH1 108 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 NKX2-6A6NCS4 301 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 OR5B21A6NL26 309 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 TNFRSF11BO00300 401 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 HNRNPDLO14979 420 aaKnown RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 RBFOX2O43251 390 aaKnown RBP eCLIP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 PLPP2O43688 288 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 DCNP07585 359 aaKnown RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 FCARP24071 287 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 CEACAM3P40198 252 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 YPEL5P62699 121 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 PTGES3Q15185 160 aaKnown RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 TM4SF20Q53R12 229 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 ENPP7Q6UWV6 458 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 Q6ZPB1 254 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 LHFPL2Q6ZUX7 228 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 CBLL1Q75N03 491 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 BEST3Q8N1M1 668 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 PAQR4Q8N4S7 273 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 TOP6BLQ8N6T0 577 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 OR10G2Q8NGC3 310 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 TSLPQ969D9 159 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 NKX3-1Q99801 234 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 NICN1Q9BSH3 213 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 C1orf198Q9H425 327 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 PLK3Q9H4B4 646 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 TUBB1Q9H4B7 451 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 MTHFD2LQ9H903 347 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 MRPL17Q9NRX2 175 aaKnown RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 TMEM38BQ9NVV0 291 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 ABRACLQ9P1F3 81 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 ZNF70Q9UC06 446 aaPredicted RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 YARS2Q9Y2Z4 477 aaKnown RBP8.01□□□□□ -1.13
COMMD3-215ENST00000602574 LY75O60449 1722 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 PARP14Q460N5 1801 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 RLFQ13129 1914 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 MIA3Q5JRA6 1907 aa8.01□□□□□ -1.13
COMMD3-215ENST00000602574 OR7C2O60412 319 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 SLC16A8O95907 504 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 MT-CO1P00395 513 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 MMP2P08253 660 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 GPX2P18283 190 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 CHI3L1P36222 383 aaPredicted RBP8□□□□□ -1.13
COMMD3-215ENST00000602574 CXCR3P49682 368 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 FLT3LGP49771 235 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 RIPPLY3P57055 190 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 ZNF763Q0D2J5 394 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 NFATC2Q13469 925 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 GPNMBQ14956 572 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 KIAA0040Q15053 153 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 PODNL1Q6PEZ8 512 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 MBOAT2Q6ZWT7 520 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 SYT13Q7L8C5 426 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 ETFBKMTQ8IXQ9 262 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 ZNF519Q8TB69 540 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 SECTM1Q8WVN6 248 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 ATXN7L3BQ96GX2 97 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 GUCD1Q96NT3 240 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 FEVQ99581 238 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 TMEM134Q9H6X4 195 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 YAE1D1Q9NRH1 226 aa8□□□□□ -1.13
COMMD3-215ENST00000602574 NRXN2Q9P2S2 1712 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms