RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 RPL7L1Q6DKI1 246 aaKnown RBP7.99□□□□□ -1.13
CSMD1-216ENST00000602557 OR5K2Q8NHB8 316 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 PPP1R35Q8TAP8 253 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 SNX22Q96L94 193 aa7.99□□□□□ -1.13
CSMD1-216ENST00000602557 ELAVL4P26378 380 aaKnown RBP7.98□□□□□ -1.13
CSMD1-216ENST00000602557 PTGER4P35408 488 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 HOXA1P49639 335 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-216ENST00000602557 TRA2BP62995 288 aaKnown RBP7.98□□□□□ -1.13
CSMD1-216ENST00000602557 UQCC3Q6UW78 93 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 BTNL8Q6UX41 500 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF813Q6ZN06 617 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 CMTM4Q8IZR5 234 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 GFRA2O00451 464 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 CD37P11049 281 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 PSMB6P28072 239 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 VASPP50552 380 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-216ENST00000602557 F2RL1P55085 397 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 OPN5Q6U736 354 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ISL2Q96A47 359 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 UBQLN3Q9H347 655 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ZCCHC4Q9H5U6 513 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 A0A1B0GUH1 482 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 OR7C1O76099 320 aaPredicted RBP7.98□□□□□ -1.13
CSMD1-216ENST00000602557 PAPLNO95428 1278 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 CYBAP13498 195 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 DCTDP32321 178 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 TUSC1Q2TAM9 212 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 RTL6Q6ICC9 239 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 SLC39A5Q6ZMH5 540 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 EGLN2Q96KS0 407 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 TAAR2Q9P1P5 351 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 C17orf112F2Z3M2 114 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 NAGAP17050 411 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 SULT1A2P50226 295 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 CTF1Q16619 201 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 GLYATL3Q5SZD4 288 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 VHLLQ6RSH7 139 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 SEZ6L2Q6UXD5 910 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 MMP21Q8N119 569 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 KIRREL1Q96J84 757 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF583Q96ND8 569 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.98□□□□□ -1.13
CSMD1-216ENST00000602557 CCDC187A0A096LP49 1063 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 CXorf65A6NEN9 183 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 TMEM200CA6NKL6 621 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 SIGLEC5O15389 551 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 CTSAP10619 480 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 OR1D4P47884 311 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ISL1P61371 349 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 SIGLEC14Q08ET2 396 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 PRICKLE2Q7Z3G6 844 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ARRDC2Q8TBH0 407 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 SERTM2A0A1B0GWG4 89 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 RAB29O14966 203 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 KLHDC1Q8N7A1 406 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ST6GAL2Q96JF0 529 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 OPALINQ96PE5 141 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 LHX3Q9UBR4 397 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 RALYQ9UKM9 306 aaKnown RBP7.98□□□□□ -1.13
CSMD1-216ENST00000602557 DDAH2O95865 285 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 HEXAP06865 529 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ATXN1LP0C7T5 689 aaKnown RBP7.98□□□□□ -1.13
CSMD1-216ENST00000602557 RFC3P40938 356 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 RGRP47804 291 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 HTR5AP47898 357 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 KCNJ10P78508 379 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 TAS1R1Q7RTX1 841 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 MISPQ8IVT2 679 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 DMBX1Q8NFW5 382 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 TMEM106AQ96A25 262 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 CMTM3Q96MX0 182 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 EVA1AQ9H8M9 152 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 OR1A1Q9P1Q5 309 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 KCNG2Q9UJ96 466 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 SRPK3Q9UPE1 567 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 G3V3Y1 287 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 TIMP1P01033 207 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 SULT1A3P0DMM9 295 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 SULT1A4P0DMN0 295 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 FCGR2AP12318 317 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 PPP1CBP62140 327 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 SNRPGP62308 76 aaKnown RBP7.98□□□□□ -1.13
CSMD1-216ENST00000602557 FABP5Q01469 135 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 TMEM65Q6PI78 240 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ASB13Q8WXK3 278 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 DDX60LQ5H9U9 1706 aaKnown RBP7.98□□□□□ -1.13
CSMD1-216ENST00000602557 CHEK1O14757 476 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ABLIM2Q6H8Q1 611 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ISOC2Q96AB3 205 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ATOH8Q96SQ7 321 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ARNTLO00327 626 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ALOX5APP20292 161 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 NR0B2Q15466 257 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 LPCAT3Q6P1A2 487 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 OR1J1Q8NGS3 322 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 OR13C8Q8NGS7 320 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 PRR14Q9BWN1 585 aa7.98□□□□□ -1.13
CSMD1-216ENST00000602557 ZNF865P0CJ78 1059 aaPredicted RBP7.97□□□□□ -1.13
CSMD1-216ENST00000602557 RNF224P0DH78 156 aa7.97□□□□□ -1.13
CSMD1-216ENST00000602557 HIST1H3AP68431 136 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms