RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 ZNF829Q3KNS6 432 aaPredicted RBP12.65□□□□□ -0.38
ZNF548-212ENST00000602086 LRRN1Q6UXK5 716 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 UNQ9370/PRO34162Q6UXP9 181 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 RPTNQ6XPR3 784 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 TMEM91Q6ZNR0 172 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 FAM214BQ7L5A3 538 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 LINGO2Q7L985 606 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 NUFIP2Q7Z417 695 aaKnown RBP12.65□□□□□ -0.38
ZNF548-212ENST00000602086 DPPA2Q7Z7J5 298 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.65□□□□□ -0.38
ZNF548-212ENST00000602086 LINC00346Q8IVM7 164 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 ZNF100Q8IYN0 542 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 ABHD4Q8TB40 342 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 NDNFQ8TB73 568 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 FAM57AQ8TBR7 257 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 TRMT61AQ96FX7 289 aaKnown RBP12.65□□□□□ -0.38
ZNF548-212ENST00000602086 C4orf45Q96LM5 186 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 ALKBH3Q96Q83 286 aaPredicted RBP12.65□□□□□ -0.38
ZNF548-212ENST00000602086 TRIB1Q96RU8 372 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 TSC22D3Q99576 134 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 TMED9Q9BVK6 235 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 TTTY10Q9BZA0 68 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 MOB1AQ9H8S9 216 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 EXOSC4Q9NPD3 245 aaKnown RBP12.65□□□□□ -0.38
ZNF548-212ENST00000602086 PNRC2Q9NPJ4 139 aaKnown RBP12.65□□□□□ -0.38
ZNF548-212ENST00000602086 CCDC59Q9P031 241 aaKnown RBP12.65□□□□□ -0.38
ZNF548-212ENST00000602086 ASH2LQ9UBL3 628 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 EMC9Q9Y3B6 208 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 R4GMQ9 66 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 ARHGAP21Q5T5U3 1957 aa12.65□□□□□ -0.38
ZNF548-212ENST00000602086 PNMA8CA0A1B0GUJ8 204 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 OR4C45A6NMZ5 311 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 FARS2O95363 451 aaKnown RBP12.64□□□□□ -0.39
ZNF548-212ENST00000602086 CD8BP10966 210 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 ZNF182P17025 639 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-212ENST00000602086 PSMB10P40306 273 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 NANOS3P60323 173 aaKnown RBP12.64□□□□□ -0.39
ZNF548-212ENST00000602086 SLC3A1Q07837 685 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 SCRN3Q0VDG4 424 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 ECH1Q13011 328 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 FBXW9Q5XUX1 488 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 CATSPERDQ86XM0 798 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-212ENST00000602086 SLC22A24Q8N4F4 322 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 OR10S1Q8NGN2 331 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 OR6K3Q8NGY3 331 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 TMEM203Q969S6 136 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 ZNF837Q96EG3 531 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-212ENST00000602086 BOD1Q96IK1 185 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 DCUN1D5Q9BTE7 237 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 COMMD4Q9H0A8 199 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 ZNF71Q9NQZ8 489 aaPredicted RBP12.64□□□□□ -0.39
ZNF548-212ENST00000602086 FRRS1LQ9P0K9 344 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 UPB1Q9UBR1 384 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 ATPIF1Q9UII2 106 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 CLEC4AQ9UMR7 237 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 CACNA1CQ13936 2221 aa12.64□□□□□ -0.39
ZNF548-212ENST00000602086 PSMD9O00233 223 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 RPP14O95059 124 aaKnown RBP12.63□□□□□ -0.39
ZNF548-212ENST00000602086 ZFPL1O95159 310 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 APOC1P02654 83 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 ISG15P05161 165 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 MPGP29372 298 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 TIMP3P35625 211 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 SERPINB10P48595 397 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 MTNR1BP49286 362 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 RPS11P62280 158 aaKnown RBP eCLIP12.63□□□□□ -0.39
ZNF548-212ENST00000602086 KLRB1Q12918 225 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 OR7E24Q6IFN5 339 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 CORO6Q6QEF8 472 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 KLHL24Q6TFL4 600 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 CFAP77Q6ZQR2 320 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 IL17RDQ8NFM7 739 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 OR5M9Q8NGP3 310 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 OR5AK2Q8NH90 309 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 HDHD5Q9BXW7 423 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 HDHD2Q9H0R4 259 aa12.63□□□□□ -0.39
ZNF548-212ENST00000602086 FLNBO75369 2602 aaKnown RBP12.63□□□□□ -0.39
ZNF548-212ENST00000602086 TRAV1-2A0A0B4J238 106 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 TRBV5-5A0A0J9YX44 114 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 ARL6IP5O75915 188 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 WNT11O96014 354 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 RAF1P04049 648 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 MAPK3P27361 379 aaPredicted RBP12.62□□□□□ -0.39
ZNF548-212ENST00000602086 OTX1P32242 354 aaPredicted RBP12.62□□□□□ -0.39
ZNF548-212ENST00000602086 KIR3DL2P43630 455 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 PSMA6P60900 246 aaKnown RBP12.62□□□□□ -0.39
ZNF548-212ENST00000602086 RAB35Q15286 201 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 ACSM3Q53FZ2 586 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 WDR38Q5JTN6 314 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 ELFN2Q5R3F8 820 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 C1orf185Q5T7R7 199 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 OTPQ5XKR4 325 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 C22orf42Q6IC83 251 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 ZNF585AQ6P3V2 769 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 PLXDC2Q6UX71 529 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 TFAP2EQ6VUC0 442 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 ZNF813Q6ZN06 617 aa12.62□□□□□ -0.39
ZNF548-212ENST00000602086 ZNF704Q6ZNC4 412 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms