RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 NOX4Q9NPH5 578 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 FANCFQ9NPI8 374 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 DIABLOQ9NR28 239 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 NUDT15Q9NV35 164 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 ING4Q9UNL4 249 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 V9GY05 133 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 NCOR2Q9Y618 2525 aa10.41□□□□□ -0.74
VRK3-223ENST00000601341 MPDZO75970 2070 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 DMXL2Q8TDJ6 3036 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 A0A087WV48 116 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 A0A0A6YYJ9 748 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 A0A0J9YW62 118 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 TTLL8A6PVC2 850 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 UPK3AO75631 287 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 ABHD16AO95870 558 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 SNRPBP14678 240 aaKnown RBP10.4□□□□□ -0.74
VRK3-223ENST00000601341 HCCSP53701 268 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 RAC3P60763 192 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 RASGEF1BQ0VAM2 473 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 IKZF1Q13422 519 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 SNTB2Q13425 540 aaKnown RBP10.4□□□□□ -0.74
VRK3-223ENST00000601341 ACKR1Q16570 336 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 ZNF239Q16600 458 aaKnown RBP10.4□□□□□ -0.74
VRK3-223ENST00000601341 PDSS1Q5T2R2 415 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 EEF1A1P5Q5VTE0 462 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 TMEM225Q6GV28 225 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 LYPD4Q6UWN0 246 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 GGNQ86UU5 652 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 LSM14AQ8ND56 463 aaKnown RBP10.4□□□□□ -0.74
VRK3-223ENST00000601341 LGALS14Q8TCE9 139 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 MAP6Q96JE9 813 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 PDCD1LG2Q9BQ51 273 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 CACNG6Q9BXT2 260 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 TXNIPQ9H3M7 391 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 ZDHHC11Q9H8X9 412 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 WDR76Q9H967 626 aa10.4□□□□□ -0.74
VRK3-223ENST00000601341 ZNF346Q9UL40 294 aaKnown RBP10.4□□□□□ -0.74
VRK3-223ENST00000601341 CACNA1AO00555 2505 aa10.4□□□□□ -0.75
VRK3-223ENST00000601341 LAMA5O15230 3695 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 A0A1W2PNV4 684 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 NPIPB13A6NJU9 1138 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 AQP7P3A6NL99 342 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 C1QTNF9BB2RNN3 333 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 NPIPB4C9JG80 1138 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 EIF1AYO14602 144 aaKnown RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 XKRYO14609 159 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 TNFSF11O14788 317 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 PIN1P1O15428 100 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ZNF780AO75290 641 aaPredicted RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 SERPINI2O75830 405 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ALX3O95076 343 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 VAMP5O95183 116 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ACTL6AO96019 429 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ITGB2P05107 769 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 C1QTNF9P0C862 333 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ANXA3P12429 323 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ZNF24P17028 368 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ALOX5APP20292 161 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 STARP49675 285 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 DAP3P51398 398 aaKnown RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 CARD18P57730 90 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 H3F3AP84243 136 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 RNFT1Q5M7Z0 435 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 UNQ6494/PRO21346Q6UXR6 183 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 DNM1P46Q6ZS02 220 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 Q6ZS92 163 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 GLCCI1Q86VQ1 547 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 SIAH3Q8IW03 269 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 KDM8Q8N371 416 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 OR51L1Q8NGJ5 315 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 OR5AK2Q8NH90 309 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 OR2V1Q8NHB1 315 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 SMAP2Q8WU79 429 aaPredicted RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 ZNRF4Q8WWF5 429 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ASB17Q8WXJ9 295 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 HSD17B8Q92506 261 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 S100A16Q96FQ6 103 aaKnown RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 ABHD17AQ96GS6 310 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 RADILQ96JH8 1075 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 TSPAN32Q96QS1 320 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 NAA11Q9BSU3 229 aaPredicted RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 SLC6A15Q9H2J7 730 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 LDAHQ9H6V9 325 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 FKBP7Q9Y680 259 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 IGF2RP11717 2491 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 TRBV5-7A0A0A0MS05 114 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 LOC102725191A0A1B0GVB3 256 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 ZNF254O75437 659 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 PLGP00747 810 aaPredicted RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 IGHMP01871 453 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 PDGFAP04085 211 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 P2RY4P51582 365 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 CCR9P51686 369 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 NANOS3P60323 173 aaKnown RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 RPL27P61353 136 aaKnown RBP10.39□□□□□ -0.75
VRK3-223ENST00000601341 CXADRP78310 365 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 DGCR2P98153 550 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 HSF1Q00613 529 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 MADCAM1Q13477 382 aa10.39□□□□□ -0.75
VRK3-223ENST00000601341 BCL2L15Q5TBC7 163 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms