RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 GATAD2BQ8WXI9 593 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 TAAR8Q969N4 342 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 MSI2Q96DH6 328 aaKnown RBP11.22□□□□□ -0.61
SCAF1-202ENST00000595242 KATNB1Q9BVA0 655 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 ALG8Q9BVK2 526 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 CACNG6Q9BXT2 260 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 RNF167Q9H6Y7 350 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 TXNL4BQ9NX01 149 aaKnown RBP11.22□□□□□ -0.61
SCAF1-202ENST00000595242 CLEC4AQ9UMR7 237 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 TMED7Q9Y3B3 224 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 ADAM18Q9Y3Q7 739 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 CORINQ9Y5Q5 1042 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 NOX1Q9Y5S8 564 aa11.22□□□□□ -0.61
SCAF1-202ENST00000595242 TMEM72A0PK05 275 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 ZC3H12DA2A288 527 aaKnown RBP11.21□□□□□ -0.61
SCAF1-202ENST00000595242 C17orf51A8MQB3 221 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 H3BML4 177 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 RAMP1O60894 148 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 IGHMP01871 453 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 CLUP10909 449 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 BMP4P12644 408 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 PRKCAP17252 672 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 SOX6P35712 828 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 ATP6V1E1P36543 226 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 AQP2P41181 271 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 ETV6P41212 452 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 DIO1P49895 249 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 MAP2K6P52564 334 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 DSCR4P56555 118 aaPredicted RBP11.21□□□□□ -0.61
SCAF1-202ENST00000595242 CLDN20P56880 219 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 TAS2R43P59537 309 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 RPS25P62851 125 aaKnown RBP11.21□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF85Q03923 595 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 RPL18Q07020 188 aaKnown RBP11.21□□□□□ -0.61
SCAF1-202ENST00000595242 RAB35Q15286 201 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 KLHL12Q53G59 568 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 AGAP6Q5VW22 663 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 RAET1LQ5VY80 246 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 IGFN1Q86VF2 1251 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 EGFL6Q8IUX8 553 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 SYS1Q8N2H4 156 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 CYB561A3Q8NBI2 242 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 OR4K13Q8NH42 304 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 DUSP19Q8WTR2 217 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 GMPPAQ96IJ6 420 aaPredicted RBP11.21□□□□□ -0.61
SCAF1-202ENST00000595242 ASPNQ9BXN1 380 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 PRRG4Q9BZD6 226 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 OR51V1Q9H2C8 321 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 SDHAF3Q9NRP4 125 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 MOKQ9UQ07 419 aa11.21□□□□□ -0.61
SCAF1-202ENST00000595242 NOTCH1P46531 2555 aa11.21□□□□□ -0.62
SCAF1-202ENST00000595242 TEX13CA0A0J9YWL9 993 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 IQCMA0A1B0GVH7 501 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 DAPL1A0PJW8 107 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 DPRXA6NFQ7 191 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 FTCDNL1E5RQL4 147 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 ZNF208O43345 1280 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 OR2T1O43869 369 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 GLCEO94923 617 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 NUDT14O95848 222 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 TFP02787 698 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 MT-ND5P03915 603 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 CD1AP06126 327 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 OR2T7P0C7T2 308 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 SPI1P17947 270 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 ADH6P28332 368 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 CD40LGP29965 261 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 APOBEC1P41238 236 aaKnown RBP11.2□□□□□ -0.62
SCAF1-202ENST00000595242 CTXN1P60606 82 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 RPS7P62081 194 aaKnown RBP11.2□□□□□ -0.62
SCAF1-202ENST00000595242 ERVK-25P63136 954 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 DEFA6Q01524 100 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 HSF2Q03933 536 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 TSC22D1Q15714 1073 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 TAB1Q15750 504 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 LINC01590Q5TEZ4 76 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 C1orf140Q5VVS0 124 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 ZBTB46Q86UZ6 589 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 ATP6V1C2Q8NEY4 427 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 OR5M1Q8NGP8 315 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 OR2T27Q8NH04 317 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 FNDC8Q8TC99 324 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 HSD17B8Q92506 261 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 OTULINQ96BN8 352 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 Q96M85 177 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 CNN2Q99439 309 aaKnown RBP11.2□□□□□ -0.62
SCAF1-202ENST00000595242 HDHD5Q9BXW7 423 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 OCEL1Q9H607 264 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 EXOSC4Q9NPD3 245 aaKnown RBP11.2□□□□□ -0.62
SCAF1-202ENST00000595242 TRIM36Q9NQ86 728 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 BABAM2Q9NXR7 383 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 PEX16Q9Y5Y5 336 aa11.2□□□□□ -0.62
SCAF1-202ENST00000595242 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
SCAF1-202ENST00000595242 OR6C68A6NDL8 312 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 LINC01387J3KSC0 135 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 SS18L1O75177 396 aaPredicted RBP11.19□□□□□ -0.62
SCAF1-202ENST00000595242 AHSA1O95433 338 aa11.19□□□□□ -0.62
SCAF1-202ENST00000595242 HLA-DPB1P04440 258 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms