RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 ZNF3P17036 446 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 ALDH3B1P43353 468 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 CCNIQ14094 377 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 CRMP1Q14194 572 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 ATP6AP1Q15904 470 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 ZSCAN26Q16670 478 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 ZNF718Q3SXZ3 478 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 SLC18B1Q6NT16 456 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 SLC27A4Q6P1M0 643 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 CLEC9AQ6UXN8 241 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 HS3ST5Q8IZT8 346 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 CYB561A3Q8NBI2 242 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 PROKR2Q8NFJ6 384 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 COG8Q96MW5 612 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 COQ7Q99807 217 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 SMR3AQ99954 134 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 CDADC1Q9BWV3 514 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 NMNAT2Q9BZQ4 307 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 TAAR3PQ9P1P4 343 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 CYB5R1Q9UHQ9 305 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 AP4S1Q9Y587 144 aa13.76□□□□□ -0.21
RETREG3-206ENST00000588423 MAP1AP78559 2803 aaPredicted RBP13.76□□□□□ -0.21
RETREG3-206ENST00000588423 A0A096LNT2 108 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 RIIAD1A6NNX1 92 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 VWC2LB2RUY7 222 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 CLPTM1O96005 669 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 HLA-DQA2P01906 255 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 FCGR1AP12314 374 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 PRKACGP22612 351 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 GCH1P30793 250 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 GGT2P36268 569 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 BLVRAP53004 296 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 PPP1CBP62140 327 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
RETREG3-206ENST00000588423 NKPD1Q17RQ9 610 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 ELFN2Q5R3F8 820 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 OTPQ5XKR4 325 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 RFPL4BQ6ZWI9 263 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 ZCCHC24Q8N2G6 241 aaKnown RBP13.75□□□□□ -0.21
RETREG3-206ENST00000588423 ATG16L2Q8NAA4 619 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 ICA1LQ8NDH6 482 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 OR5K1Q8NHB7 308 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 ABHD4Q8TB40 342 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 SLC25A40Q8TBP6 338 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 KLF14Q8TD94 323 aaPredicted RBP13.75□□□□□ -0.21
RETREG3-206ENST00000588423 TPK1Q9H3S4 243 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 MRPL22Q9NWU5 206 aaKnown RBP13.75□□□□□ -0.21
RETREG3-206ENST00000588423 ARFGEF3Q5TH69 2177 aa13.75□□□□□ -0.21
RETREG3-206ENST00000588423 LY6G6DO95868 133 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 NGFP01138 241 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 MT-ND5P03915 603 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 DAOP14920 347 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 ZNF823P16415 610 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 SPI1P17947 270 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 FASP25445 335 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 PYCR1P32322 319 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 RGS6P49758 472 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 CDK5Q00535 292 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 ECH1Q13011 328 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 MAD2L1BPQ15013 274 aaPredicted RBP13.74□□□□□ -0.21
RETREG3-206ENST00000588423 FAHD1Q6P587 224 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 HIPK1Q86Z02 1210 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 ZNF786Q8N393 782 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 PARP8Q8N3A8 854 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 ZNF540Q8NDQ6 660 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 OR2AJ1Q8NGZ0 328 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 UBASH3BQ8TF42 649 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 SNX33Q8WV41 574 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 PIMREGQ9BSJ6 248 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 OR2J1Q9GZK6 312 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 HINT3Q9NQE9 182 aaKnown RBP13.74□□□□□ -0.21
RETREG3-206ENST00000588423 NKIRAS2Q9NYR9 191 aa13.74□□□□□ -0.21
RETREG3-206ENST00000588423 CGGBP1Q9UFW8 167 aaPredicted RBP13.74□□□□□ -0.21
RETREG3-206ENST00000588423 FLNAP21333 2647 aaKnown RBP13.74□□□□□ -0.21
RETREG3-206ENST00000588423 C17orf100A8MU93 164 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 RRP9O43818 475 aaKnown RBP13.73□□□□□ -0.21
RETREG3-206ENST00000588423 HMGN1P05114 100 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 GIFP27352 417 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 FMO3P31513 532 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 LIPAP38571 399 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 MPV17P39210 176 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 RIPPLY3P57055 190 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 MRPS11P82912 194 aaKnown RBP13.73□□□□□ -0.21
RETREG3-206ENST00000588423 DBPQ10586 325 aaPredicted RBP13.73□□□□□ -0.21
RETREG3-206ENST00000588423 GINS1Q14691 196 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 PCK2Q16822 640 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 PCGF3Q3KNV8 242 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 KRTAP27-1Q3LI81 207 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 TEX30Q5JUR7 227 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 SPATA46Q5T0L3 261 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 CORO6Q6QEF8 472 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 CFAP77Q6ZQR2 320 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.73□□□□□ -0.21
RETREG3-206ENST00000588423 IQCF1Q8N6M8 205 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 OR9Q1Q8NGQ5 310 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 ZNRF4Q8WWF5 429 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 SLC25A19Q9HC21 320 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 PAPOLBQ9NRJ5 636 aaKnown RBP13.73□□□□□ -0.21
RETREG3-206ENST00000588423 CYSLTR2Q9NS75 346 aa13.73□□□□□ -0.21
RETREG3-206ENST00000588423 KIF17Q9P2E2 1029 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms