RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OR2Z1Q8NG97 314 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 OR52J3Q8NH60 311 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 ZNF418Q8TF45 676 aaPredicted RBP12.12□□□□□ -0.47
VMP1-206ENST00000587945 RSRC1Q96IZ7 334 aaKnown RBP12.12□□□□□ -0.47
VMP1-206ENST00000587945 C7orf34Q96L11 122 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 TSSK2Q96PF2 358 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 DIRC2Q96SL1 478 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 ELAC2Q9BQ52 826 aaKnown RBP12.12□□□□□ -0.47
VMP1-206ENST00000587945 WACQ9BTA9 647 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 NDEL1Q9GZM8 345 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 NUAK2Q9H093 628 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 NRIP3Q9NQ35 241 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 VSX1Q9NZR4 365 aaPredicted RBP12.12□□□□□ -0.47
VMP1-206ENST00000587945 CGGBP1Q9UFW8 167 aaPredicted RBP12.12□□□□□ -0.47
VMP1-206ENST00000587945 OPN4Q9UHM6 478 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 RPS6KA6Q9UK32 745 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 PCDHB10Q9UN67 800 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 NPTNQ9Y639 398 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 V9GYQ6 96 aa12.12□□□□□ -0.47
VMP1-206ENST00000587945 NDUFAB1O14561 156 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 RER1O15258 196 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 RHCEP18577 417 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 CDKN2AP42771 156 aaKnown RBP12.11□□□□□ -0.47
VMP1-206ENST00000587945 CENPAP49450 140 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 SCGB2A2Q13296 93 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 AQP6Q13520 282 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 MEP1BQ16820 701 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 GPR139Q6DWJ6 353 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 C12orf54Q6X4T0 127 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 ZER1Q7Z7L7 766 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
VMP1-206ENST00000587945 OR5AS1Q8N127 324 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 NPEPL1Q8NDH3 523 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 OR1F12Q8NHA8 337 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 ITLN1Q8WWA0 313 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 GPX7Q96SL4 187 aaPredicted RBP12.11□□□□□ -0.47
VMP1-206ENST00000587945 MYLK2Q9H1R3 596 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 C7orf69Q9H7B7 122 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 TMEM106BQ9NUM4 274 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 DCAF13Q9NV06 445 aaKnown RBP12.11□□□□□ -0.47
VMP1-206ENST00000587945 ADA2Q9NZK5 511 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 AURKCQ9UQB9 309 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 NBEAL1Q6ZS30 2694 aa12.11□□□□□ -0.47
VMP1-206ENST00000587945 OR6C6A6NF89 314 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 UNC119BA6NIH7 251 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 J3QLI3 93 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 DCTN6O00399 190 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 IGHV2-70P01814 119 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 KITLGP21583 273 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 TNFSF4P23510 183 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 LSM6P62312 80 aaKnown RBP12.1□□□□□ -0.47
VMP1-206ENST00000587945 HLXQ14774 488 aaPredicted RBP12.1□□□□□ -0.47
VMP1-206ENST00000587945 DPY19L2P2Q6ZN68 376 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 ST7LQ8TDW4 575 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 C22orf15Q8WYQ4 148 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 HAVCR1Q96D42 359 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 CMTM5Q96DZ9 223 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 SLC6A7Q99884 636 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 FUZQ9BT04 418 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 FAM107BQ9H098 131 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 MMP26Q9NRE1 261 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 PTTG3PQ9NZH4 202 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 POLR1DQ9Y2S0 133 aa12.1□□□□□ -0.47
VMP1-206ENST00000587945 PPP1R3DO95685 299 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 TXNDC12O95881 172 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 HILS1P60008 231 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 ACTG1P63261 375 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 OR2T2Q6IF00 324 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 CORO6Q6QEF8 472 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 ADCK1Q86TW2 530 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 TEX29Q8N6K0 151 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 ZNF283Q8N7M2 679 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 ATG16L2Q8NAA4 619 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 NANPQ8TBE9 248 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 ZFAND2BQ8WV99 257 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 PTP4A1Q93096 173 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 DHRS1Q96LJ7 313 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 SAMD8Q96LT4 415 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 ERMAPQ96PL5 475 aaPredicted RBP12.09□□□□□ -0.47
VMP1-206ENST00000587945 OR2V2Q96R30 315 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 SPAG4Q9NPE6 437 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 MED4Q9NPJ6 270 aa12.09□□□□□ -0.47
VMP1-206ENST00000587945 SAMD4AQ9UPU9 718 aaKnown RBP12.09□□□□□ -0.47
VMP1-206ENST00000587945 GMNNO75496 209 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 TUBG1P23258 451 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 CFPP27918 469 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 MSX2P35548 267 aaPredicted RBP12.08□□□□□ -0.48
VMP1-206ENST00000587945 RPS6KA3P51812 740 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 SEC61A1P61619 476 aaKnown RBP12.08□□□□□ -0.48
VMP1-206ENST00000587945 SPIBQ01892 262 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 KRT72Q14CN4 511 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 ZMYND11Q15326 602 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 SMARCD3Q6STE5 483 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 USP43Q70EL4 1123 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 LRRC28Q86X40 367 aaPredicted RBP12.08□□□□□ -0.48
VMP1-206ENST00000587945 OR10AD1Q8NGE0 317 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 FANK1Q8TC84 345 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 SIGLEC11Q96RL6 698 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 WDR76Q9H967 626 aa12.08□□□□□ -0.48
VMP1-206ENST00000587945 SRA1Q9HD15 236 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms