RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TRIM16LQ309B1 348 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF470Q6ECI4 717 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 XKRXQ6PP77 449 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 AGTRAPQ6RW13 159 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TMIGD1Q6UXZ0 262 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 HACD2Q6Y1H2 254 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 HSDL2Q6YN16 418 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 C3orf62Q6ZUJ4 267 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 P2RY8Q86VZ1 359 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MICU2Q8IYU8 434 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IQCKQ8N0W5 287 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 METTL4Q8N3J2 472 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CSNK1A1LQ8N752 337 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM104Q8NE00 496 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FBXO36Q8NEA4 188 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 BEST4Q8NFU0 473 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2L3Q8NG85 312 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR52K1Q8NGK4 314 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 KCNG3Q8TAE7 436 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 LRRC20Q8TCA0 184 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 WFDC5Q8TCV5 224 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GRHL3Q8TE85 626 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM234Q8WY98 164 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IFT81Q8WYA0 676 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF501Q96CX3 271 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SMIM10Q96HG1 83 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SENP5Q96HI0 755 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TMEM121Q9BTD3 319 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 C20orf24Q9BUV8 137 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PINK1Q9BXM7 581 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FGF22Q9HCT0 170 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ABCB9Q9NP78 766 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 EXOSC3Q9NQT5 275 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GPR83Q9NYM4 423 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 STMN3Q9NZ72 180 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MIOXQ9UGB7 285 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 BTNL2Q9UIR0 455 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC35A3Q9Y2D2 325 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ZNF780BQ9Y6R6 833 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 FBN1P35555 2871 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SPAG17Q6Q759 2223 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IGHV4-4A0A075B6R2 117 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IGLV3-32A0A0A0MS00 114 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IGLV9-49A0A0B4J1Y8 123 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 EFCAB7A8K855 629 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 KCNK1O00180 336 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PPIHO43447 177 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 LANCL1O43813 399 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SUPT3HO75486 399 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 VAPBO95292 243 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CLDN1O95832 211 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IL6P05231 212 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SERPIND1P05546 499 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR9G9P0C7N8 305 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IGHV4-31P0DP07 118 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IDO1P14902 403 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 IL1RNP18510 177 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PCMT1P22061 227 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PRKACGP22612 351 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GCAP28676 217 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GTF2E2P29084 291 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PRDX3P30048 256 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CHRNB4P30926 498 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 MPIP34949 423 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CAPGP40121 348 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CCNG1P51959 295 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 DIO3P55073 304 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 RPL27P61353 136 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 DYNLT1P63172 113 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CCL7P80098 99 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SELPLGQ14242 412 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 RAB35Q15286 201 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 NSDHLQ15738 373 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 DMRTC1Q5HYR2 192 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TPRG1LQ5T0D9 272 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CBLN3Q6UW01 205 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 GPRIN3Q6ZVF9 776 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SSX9Q7RTT3 188 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 CEACAM19Q7Z692 300 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC22A16Q86VW1 577 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ERI1Q8IV48 349 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ST13P4Q8IZP2 240 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SLC25A45Q8N413 288 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 COMMD1Q8N668 190 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ANKFN1Q8N957 763 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ST6GALNAC3Q8NDV1 305 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR2M7Q8NG81 312 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR52E4Q8NGH9 312 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR6F1Q8NGZ6 308 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 SMAP2Q8WU79 429 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 DNAJA4Q8WW22 397 aaPredicted RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TCTEX1D2Q8WW35 142 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 OR5P2Q8WZ92 322 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 TESCQ96BS2 214 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 DNAJC1Q96KC8 554 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 C7orf34Q96L11 122 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 LURAP1Q96LR2 239 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 C10orf90Q96M02 699 aa1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 PAPOLGQ9BWT3 736 aaKnown RBP1.64□□□□□ -2.15
SMCHD1-211ENST00000584897 ILKAPQ9H0C8 392 aaPredicted RBP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms