RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 PGBD2Q6P3X8 592 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 SMARCD3Q6STE5 483 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 C17orf107Q6ZR85 190 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 SPATC1Q76KD6 591 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 SKA3Q8IX90 412 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 KIR3DL3Q8N743 410 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 FANK1Q8TC84 345 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 POP5Q969H6 163 aaKnown RBP8.66□□□□□ -1.02
GGA3-219ENST00000584550 RASD2Q96D21 266 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 ZNF570Q96NI8 536 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 RBP7Q96R05 134 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 SH3GL3Q99963 347 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 MRPL13Q9BYD1 178 aaKnown RBP8.66□□□□□ -1.02
GGA3-219ENST00000584550 RERGLQ9H628 205 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 RNF121Q9H920 327 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 NUP50Q9UKX7 468 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 IER3IP1Q9Y5U9 82 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 CACNG2Q9Y698 323 aa8.66□□□□□ -1.02
GGA3-219ENST00000584550 IGKV1D-43A0A0B4J1Z2 117 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 A0A1W2PPL8 197 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 NPIPB13A6NJU9 1138 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 NPIPB4C9JG80 1138 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 EBAG9O00559 213 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 TPD52L2O43399 206 aaKnown RBP8.65□□□□□ -1.02
GGA3-219ENST00000584550 E2F6O75461 281 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 CIB2O75838 187 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 FARS2O95363 451 aaKnown RBP8.65□□□□□ -1.02
GGA3-219ENST00000584550 PPP1R3DO95685 299 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 GPANK1O95872 356 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 CLPTM1O96005 669 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 KNG1P01042 644 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 GASTP01350 101 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 ZNF35P13682 527 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 FPR3P25089 353 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 GIPRP48546 466 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 PTDSS1P48651 473 aaKnown RBP8.65□□□□□ -1.02
GGA3-219ENST00000584550 HMGA2P52926 109 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 FXYD6P3P58550 94 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 GALK2Q01415 458 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 SGCAQ16586 387 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 HIST3H3Q16695 136 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 CLEC12AQ5QGZ9 265 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 FAM205BPQ63HN1 556 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 C1orf94Q6P1W5 598 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 DPY19L2P2Q6ZN68 376 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 CCDC36Q8IYA8 594 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 LRRC18Q8N456 261 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 SLC22A24Q8N4F4 322 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 AQP11Q8NBQ7 271 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 OR4C15Q8NGM1 316 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 FGFBP3Q8TAT2 258 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 ZNF519Q8TB69 540 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 UBE2FQ969M7 185 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 SAMD8Q96LT4 415 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 ERMAPQ96PL5 475 aaPredicted RBP8.65□□□□□ -1.02
GGA3-219ENST00000584550 ALG12Q9BV10 488 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 IFT27Q9BW83 186 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 LRMDAQ9H2I8 198 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 MMP27Q9H306 513 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 OR52D1Q9H346 318 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 ZMAT3Q9HA38 289 aaKnown RBP8.65□□□□□ -1.02
GGA3-219ENST00000584550 TNFRSF19Q9NS68 423 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 TMEM38BQ9NVV0 291 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 UBAP1Q9NZ09 502 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 TAAR3PQ9P1P4 343 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 WIPI2Q9Y4P8 454 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 WNK1Q9H4A3 2382 aa8.65□□□□□ -1.02
GGA3-219ENST00000584550 IGHV3OR16-10A0A075B7F0 116 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 IGHV1-69-2A0A0G2JMI3 117 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 TCRBV3S1A0A5B6 114 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 ISPDA4D126 451 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 CENPBD1B2RD01 187 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 M0QZ24 198 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 IMPA2O14732 288 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 FKBP6O75344 327 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 RAB36O95755 333 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 OR8G3PP0DMU2 310 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 NR2C1P13056 603 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 GATA3P23771 443 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 SLC6A6P31641 620 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 GUCA1AP43080 201 aaPredicted RBP8.64□□□□□ -1.03
GGA3-219ENST00000584550 GSSP48637 474 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 CENPAP49450 140 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 RPS6KA3P51812 740 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 RAB1AP62820 205 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 TSPAN31Q12999 210 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 HNRNPA0Q13151 305 aaKnown RBP8.64□□□□□ -1.03
GGA3-219ENST00000584550 KRR1Q13601 381 aaKnown RBP8.64□□□□□ -1.03
GGA3-219ENST00000584550 TSTQ16762 297 aaKnown RBP8.64□□□□□ -1.03
GGA3-219ENST00000584550 MICAQ29983 383 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 GSG1Q2KHT4 349 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 RFX4Q33E94 735 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 MESTQ5EB52 335 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 KLF17Q5JT82 389 aaPredicted RBP8.64□□□□□ -1.03
GGA3-219ENST00000584550 THEM4Q5T1C6 240 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 GPR139Q6DWJ6 353 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 TMEM154Q6P9G4 183 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 BRICD5Q6PL45 260 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 SLC25A47Q6Q0C1 308 aa8.64□□□□□ -1.03
GGA3-219ENST00000584550 SLC16A14Q7RTX9 510 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms