RNA–Protein interactions for RNA: ENST00000581540.5

SUPT4H1-207, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-207ENST00000581540 C11orf52Q96A22 123 aa6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 RNF170Q96K19 258 aa6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 NSRP1Q9H0G5 558 aaKnown RBP6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 LIME1Q9H400 295 aa6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 TUBB1Q9H4B7 451 aa6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 KIR3DX1Q9H7L2 352 aa6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 VCX3AQ9NNX9 186 aa6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 THUMPD1Q9NXG2 353 aaKnown RBP6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 EURLQ9NYK6 297 aa6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 THAP10Q9P2Z0 257 aaPredicted RBP6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 WARS2Q9UGM6 360 aaKnown RBP6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 LSM7Q9UK45 103 aaKnown RBP6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 COX11Q9Y6N1 276 aa6.36□□□□□ -1.39
SUPT4H1-207ENST00000581540 TLN1Q9Y490 2541 aaKnown RBP6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 BOD1L1Q8NFC6 3051 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 IGHV3-20A0A0C4DH32 117 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 B4DXG7 233 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 PPP1R2P9O14990 202 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 COCHO43405 550 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 GMDSO60547 372 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 EIF4E2O60573 245 aaKnown RBP6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 UGT1A9O60656 530 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 SLC19A2O60779 497 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 CST4P01036 141 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 ATP1A1P05023 1023 aaKnown RBP6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 KRT16P08779 473 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 CISD3P0C7P0 127 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 BGNP21810 368 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 UGT1A3P35503 534 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 EFNA3P52797 238 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 SSBP2P81877 361 aaPredicted RBP6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 DGCR6Q14129 220 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 FAM189A2Q15884 450 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 CARD16Q5EG05 197 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 FAM120AOSQ5T036 256 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 CYP4Z1Q86W10 505 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 BBS7Q8IWZ6 715 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 OR52B6Q8NGF0 335 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 PYROXD1Q8WU10 500 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 RPL36ALQ969Q0 106 aaKnown RBP6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 APH1AQ96BI3 265 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 LRRC45Q96CN5 670 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 RAB3CQ96E17 227 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 CELF6Q96J87 481 aaKnown RBP6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 MAP1LC3CQ9BXW4 147 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 FGF20Q9NP95 211 aaPredicted RBP6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 IL1RAPQ9NPH3 570 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 MS4A12Q9NXJ0 267 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 SAMD4AQ9UPU9 718 aaKnown RBP6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 FBXO7Q9Y3I1 522 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 STYXL1Q9Y6J8 313 aa6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 USP9YO00507 2555 aaPredicted RBP6.35□□□□□ -1.39
SUPT4H1-207ENST00000581540 ANKRD17O75179 2603 aaKnown RBP6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 SPTBN1Q01082 2364 aaKnown RBP6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 C1orf232A0A0U1RR37 186 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 PRSS37A4D1T9 235 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 PRAC2D3DTV9 90 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 H7C0C1 242 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 MAGEC1O60732 1142 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 SCN2BO60939 215 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 SEMA4FO95754 770 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 FADS2O95864 444 aaKnown RBP6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 CD55P08174 381 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 CD40LGP29965 261 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 CALCRP30988 508 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 ACOT2P49753 483 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 ATP12AP54707 1039 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 MYL6P60660 151 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 TLE4Q04727 773 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 PMS2P3Q13401 168 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 IL18R1Q13478 541 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 PGGHGQ32M88 737 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 VWA2Q5GFL6 755 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 MS4A13Q5J8X5 152 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 LCLAT1Q6UWP7 414 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 CCDC71Q8IV32 467 aaPredicted RBP6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 CMTM1Q8IZ96 169 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 SYS1Q8N2H4 156 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 SNX31Q8N9S9 440 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 HSFY1Q96LI6 401 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 C20orf173Q96LM9 149 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 SYT15Q9BQS2 421 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 UQCC2Q9BRT2 126 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 OSBPL10Q9BXB5 764 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 ANGPTL4Q9BY76 406 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 C6orf106Q9H6K1 298 aaPredicted RBP6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 B3GAT2Q9NPZ5 323 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 PRSS16Q9NQE7 514 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 SDHAF3Q9NRP4 125 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 ABCC13Q9NSE7 274 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 HRASLS2Q9NWW9 162 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 RBAKQ9NYW8 714 aaPredicted RBP6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 MGAT4AQ9UM21 535 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 PPP1R3CQ9UQK1 317 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 PCDHGB1Q9Y5G3 927 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 PLXNA2O75051 1894 aa6.34□□□□□ -1.39
SUPT4H1-207ENST00000581540 DOPEY1Q5JWR5 2465 aa6.34□□□□□ -1.4
SUPT4H1-207ENST00000581540 PTPRJQ12913 1337 aa6.33□□□□□ -1.4
SUPT4H1-207ENST00000581540 F8VP50 259 aa6.33□□□□□ -1.4
SUPT4H1-207ENST00000581540 GOLGA8RI6L899 631 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms