RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 TMEM255AQ5JRV8 349 aa15.05■□□□□ -0
MKS1-209ENST00000580127 NLRC3Q7RTR2 1065 aa15.05■□□□□ -0
MKS1-209ENST00000580127 IGFN1Q86VF2 1251 aa15.05■□□□□ -0
MKS1-209ENST00000580127 C1orf87Q8N0U7 546 aa15.05■□□□□ -0
MKS1-209ENST00000580127 BCL6BQ8N143 479 aaPredicted RBP15.05■□□□□ -0
MKS1-209ENST00000580127 CLDN22Q8N7P3 220 aa15.05■□□□□ -0
MKS1-209ENST00000580127 ZNF582Q96NG8 517 aaPredicted RBP15.05■□□□□ -0
MKS1-209ENST00000580127 OR2V2Q96R30 315 aa15.05■□□□□ -0
MKS1-209ENST00000580127 AP3M1Q9Y2T2 418 aa15.05■□□□□ -0
MKS1-209ENST00000580127 MEGF8Q7Z7M0 2845 aa15.05■□□□□ -0
MKS1-209ENST00000580127 F5H0A9 414 aaPredicted RBP15.04■□□□□ -0
MKS1-209ENST00000580127 FBP2O00757 339 aa15.04■□□□□ -0
MKS1-209ENST00000580127 IFNW1P05000 195 aa15.04■□□□□ -0
MKS1-209ENST00000580127 RPS2P15880 293 aaKnown RBP15.04■□□□□ -0
MKS1-209ENST00000580127 CD80P33681 288 aa15.04■□□□□ -0
MKS1-209ENST00000580127 BPIFB3P59826 476 aa15.04■□□□□ -0
MKS1-209ENST00000580127 GNB2P62879 340 aa15.04■□□□□ -0
MKS1-209ENST00000580127 AQP6Q13520 282 aa15.04■□□□□ -0
MKS1-209ENST00000580127 SLC9A3R2Q15599 337 aa15.04■□□□□ -0
MKS1-209ENST00000580127 KLF17Q5JT82 389 aaPredicted RBP15.04■□□□□ -0
MKS1-209ENST00000580127 ZNF362Q5T0B9 420 aaPredicted RBP15.04■□□□□ -0
MKS1-209ENST00000580127 C1orf94Q6P1W5 598 aa15.04■□□□□ -0
MKS1-209ENST00000580127 C16orf87Q6PH81 154 aa15.04■□□□□ -0
MKS1-209ENST00000580127 ZNF730Q6ZMV8 503 aa15.04■□□□□ -0
MKS1-209ENST00000580127 C9orf139Q6ZV77 190 aa15.04■□□□□ -0
MKS1-209ENST00000580127 NRMQ8IXM6 262 aa15.04■□□□□ -0
MKS1-209ENST00000580127 PARP8Q8N3A8 854 aa15.04■□□□□ -0
MKS1-209ENST00000580127 RAB40AQ8WXH6 277 aa15.04■□□□□ -0
MKS1-209ENST00000580127 ZDHHC16Q969W1 377 aa15.04■□□□□ -0
MKS1-209ENST00000580127 RASD2Q96D21 266 aa15.04■□□□□ -0
MKS1-209ENST00000580127 ZNF583Q96ND8 569 aa15.04■□□□□ -0
MKS1-209ENST00000580127 GCM1Q9NP62 436 aa15.04■□□□□ -0
MKS1-209ENST00000580127 EMC7Q9NPA0 242 aa15.04■□□□□ -0
MKS1-209ENST00000580127 DCAF16Q9NXF7 216 aa15.04■□□□□ -0
MKS1-209ENST00000580127 KIF17Q9P2E2 1029 aa15.04■□□□□ -0
MKS1-209ENST00000580127 TRAV27A0A087WT01 109 aa15.03■□□□□ -0
MKS1-209ENST00000580127 HMGB1P1B2RPK0 211 aaPredicted RBP15.03■□□□□ -0
MKS1-209ENST00000580127 MRASO14807 208 aa15.03■□□□□ -0
MKS1-209ENST00000580127 PIP5K1CO60331 668 aa15.03■□□□□ -0
MKS1-209ENST00000580127 CD14P08571 375 aa15.03■□□□□ -0
MKS1-209ENST00000580127 LSM6P62312 80 aaKnown RBP15.03■□□□□ -0
MKS1-209ENST00000580127 ZBED5Q49AG3 693 aa15.03■□□□□ -0
MKS1-209ENST00000580127 LEG1Q6P5S2 330 aa15.03■□□□□ -0
MKS1-209ENST00000580127 Q6ZR03 302 aa15.03■□□□□ -0
MKS1-209ENST00000580127 VASH1Q7L8A9 365 aaPredicted RBP15.03■□□□□ -0
MKS1-209ENST00000580127 GLB1L2Q8IW92 636 aa15.03■□□□□ -0
MKS1-209ENST00000580127 LRRC75AQ8NAA5 344 aa15.03■□□□□ -0
MKS1-209ENST00000580127 OR2T12Q8NG77 320 aa15.03■□□□□ -0
MKS1-209ENST00000580127 OR8G5Q8NG78 346 aa15.03■□□□□ -0
MKS1-209ENST00000580127 OR1F12Q8NHA8 337 aa15.03■□□□□ -0
MKS1-209ENST00000580127 NEIL1Q96FI4 390 aaPredicted RBP15.03■□□□□ -0
MKS1-209ENST00000580127 C1QTNF5Q9BXJ0 243 aa15.03■□□□□ -0
MKS1-209ENST00000580127 A4GNTQ9UNA3 340 aa15.03■□□□□ -0
MKS1-209ENST00000580127 PRSS37A4D1T9 235 aa15.02■□□□□ -0
MKS1-209ENST00000580127 OR6C6A6NF89 314 aa15.02■□□□□ -0
MKS1-209ENST00000580127 CEACAM18A8MTB9 384 aa15.02■□□□□ -0
MKS1-209ENST00000580127 KHDRBS3O75525 346 aaKnown RBP15.02■□□□□ -0
MKS1-209ENST00000580127 FSTL3O95633 263 aa15.02■□□□□ -0
MKS1-209ENST00000580127 IRF2P14316 349 aa15.02■□□□□ -0
MKS1-209ENST00000580127 SEC61A1P61619 476 aaKnown RBP15.02■□□□□ -0
MKS1-209ENST00000580127 DEFA6Q01524 100 aa15.02■□□□□ -0
MKS1-209ENST00000580127 PDLIM3Q53GG5 364 aaPredicted RBP15.02■□□□□ -0
MKS1-209ENST00000580127 TTMPQ5BVD1 217 aa15.02■□□□□ -0
MKS1-209ENST00000580127 CYP4Z1Q86W10 505 aa15.02■□□□□ -0
MKS1-209ENST00000580127 MICU2Q8IYU8 434 aa15.02■□□□□ -0
MKS1-209ENST00000580127 FAM156AQ8NDB6 213 aa15.02■□□□□ -0
MKS1-209ENST00000580127 OR8B3Q8NGG8 313 aa15.02■□□□□ -0
MKS1-209ENST00000580127 ACOT11Q8WXI4 607 aaPredicted RBP15.02■□□□□ -0
MKS1-209ENST00000580127 APOBEC3DQ96AK3 386 aaPredicted RBP15.02■□□□□ -0
MKS1-209ENST00000580127 TMIGD2Q96BF3 282 aa15.02■□□□□ -0
MKS1-209ENST00000580127 UPRTQ96BW1 309 aa15.02■□□□□ -0
MKS1-209ENST00000580127 ZNF570Q96NI8 536 aa15.02■□□□□ -0
MKS1-209ENST00000580127 OR8B2Q96RD0 313 aa15.02■□□□□ -0
MKS1-209ENST00000580127 SIGLEC11Q96RL6 698 aa15.02■□□□□ -0
MKS1-209ENST00000580127 TMEM165Q9HC07 324 aa15.02■□□□□ -0
MKS1-209ENST00000580127 ATPIF1Q9UII2 106 aa15.02■□□□□ -0
MKS1-209ENST00000580127 TMEM5Q9Y2B1 443 aa15.02■□□□□ -0
MKS1-209ENST00000580127 TEX13CA0A0J9YWL9 993 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 ELOVL7A1L3X0 281 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 FAM220BPB1ANY3 271 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 EDF1O60869 148 aaKnown RBP15.01□□□□□ -0.01
MKS1-209ENST00000580127 GPANK1O95872 356 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 SELEP16581 610 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 GPR139Q6DWJ6 353 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 FBXW12Q6X9E4 464 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 C17orf107Q6ZR85 190 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 SPATC1Q76KD6 591 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 KLBQ86Z14 1044 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 OFCC1Q8IZS5 231 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 ZNF48Q96MX3 618 aaPredicted RBP15.01□□□□□ -0.01
MKS1-209ENST00000580127 HCAR1Q9BXC0 346 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 RERGLQ9H628 205 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 BEX1Q9HBH7 125 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 TMEM100Q9NV29 134 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 POLR1DQ9Y2S0 133 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 MMP24Q9Y5R2 645 aa15.01□□□□□ -0.01
MKS1-209ENST00000580127 IGHV2-70DA0A0C4DH43 119 aa15□□□□□ -0.01
MKS1-209ENST00000580127 KIR2DS1A0A191URI9 304 aa15□□□□□ -0.01
MKS1-209ENST00000580127 H7C1C5 153 aa15□□□□□ -0.01
MKS1-209ENST00000580127 SLC16A7O60669 478 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms