RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 EEF1E1O43324 174 aaKnown RBP14.1□□□□□ -0.15
SS18-211ENST00000578954 RAD51DO75771 328 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 UBL3O95164 117 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 KRT8P05787 483 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 DCTDP32321 178 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 RPL5P46777 297 aaKnown RBP14.1□□□□□ -0.15
SS18-211ENST00000578954 OR12D2P58182 307 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 MRPL28Q13084 256 aaKnown RBP14.1□□□□□ -0.15
SS18-211ENST00000578954 RAB35Q15286 201 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 NEDD8Q15843 81 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 TP53I3Q53FA7 332 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 HIKESHIQ53FT3 197 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 VASH1Q7L8A9 365 aaPredicted RBP14.1□□□□□ -0.15
SS18-211ENST00000578954 BHLHA15Q7RTS1 189 aaPredicted RBP14.1□□□□□ -0.15
SS18-211ENST00000578954 LUZP2Q86TE4 346 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 NANOS1Q8WY41 292 aaKnown RBP14.1□□□□□ -0.15
SS18-211ENST00000578954 RORBQ92753 470 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 RNF166Q96A37 237 aaPredicted RBP14.1□□□□□ -0.15
SS18-211ENST00000578954 PELI1Q96FA3 418 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 HDHD5Q9BXW7 423 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 TTTY10Q9BZA0 68 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 OR2H1Q9GZK4 316 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 HDHD2Q9H0R4 259 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 OR10A4Q9H209 315 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 ISG20L2Q9H9L3 353 aaKnown RBP14.1□□□□□ -0.15
SS18-211ENST00000578954 SLC17A5Q9NRA2 495 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 GALNT8Q9NY28 637 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 SLCO1C1Q9NYB5 712 aa14.1□□□□□ -0.15
SS18-211ENST00000578954 SMG1Q96Q15 3661 aaKnown RBP14.09□□□□□ -0.15
SS18-211ENST00000578954 CIB4A0PJX0 185 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 OR6C6A6NF89 314 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 MAGEB4O15481 346 aaPredicted RBP14.09□□□□□ -0.15
SS18-211ENST00000578954 LRRTM2O43300 516 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 SGCEO43556 437 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 SYNGR3O43761 229 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 INMTO95050 263 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 LALBAP00709 142 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 TACSTD2P09758 323 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 OTX1P32242 354 aaPredicted RBP14.09□□□□□ -0.15
SS18-211ENST00000578954 ARR3P36575 388 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 ASCL1P50553 236 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 GP2P55259 537 aaKnown RBP14.09□□□□□ -0.15
SS18-211ENST00000578954 PSG4Q00888 419 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 MLLT11Q13015 90 aaPredicted RBP14.09□□□□□ -0.15
SS18-211ENST00000578954 MED22Q15528 200 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 KRTAP27-1Q3LI81 207 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 ELFN2Q5R3F8 820 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 LRRN1Q6UXK5 716 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 KRT77Q7Z794 578 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 WDR31Q8NA23 367 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 RPS4Y2Q8TD47 263 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 GATAD2BQ8WXI9 593 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 ZNF75AQ96N20 296 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 COQ7Q99807 217 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 USB1Q9BQ65 265 aaKnown RBP14.09□□□□□ -0.15
SS18-211ENST00000578954 MROQ9BYG7 248 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 WNT5BQ9H1J7 359 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 NIPAL2Q9H841 368 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 NOX3Q9HBY0 568 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 ACOXLQ9NUZ1 547 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 BABAM2Q9NXR7 383 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 COQ3Q9NZJ6 369 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 ERRFI1Q9UJM3 462 aaPredicted RBP14.09□□□□□ -0.15
SS18-211ENST00000578954 IKZF2Q9UKS7 526 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 LRP12Q9Y561 859 aa14.09□□□□□ -0.15
SS18-211ENST00000578954 OR5H1A6NKK0 313 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 J3QLW9 94 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 SRSF10O75494 262 aaKnown RBP14.08□□□□□ -0.16
SS18-211ENST00000578954 HLA-HP01893 362 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 PATE4P0C8F1 98 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 COX5BP10606 129 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 ZNF19P17023 458 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 CRYGSP22914 178 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 TGM4P49221 684 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 RIDAP52758 137 aaKnown RBP14.08□□□□□ -0.16
SS18-211ENST00000578954 TAS2R43P59537 309 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 GRB2P62993 217 aaKnown RBP14.08□□□□□ -0.16
SS18-211ENST00000578954 ECH1Q13011 328 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 TIGD6Q17RP2 521 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 LIPNQ5VXI9 398 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 TMEM53Q6P2H8 277 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 FDX2Q6P4F2 183 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 FAM220AQ7Z4H9 259 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 LILRB4Q8NHJ6 448 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 PRR7Q8TB68 274 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 OPALINQ96PE5 141 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 MGLLQ99685 303 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 ATF6BQ99941 703 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 ELOVL3Q9HB03 270 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 TRIM36Q9NQ86 728 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 PLEK2Q9NYT0 353 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 GNG8Q9UK08 70 aa14.08□□□□□ -0.16
SS18-211ENST00000578954 PSMD9O00233 223 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 DOK2O60496 412 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 H2BFMP0C1H6 154 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 AGAP20933 346 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 PAX7P23759 505 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 IL32P24001 234 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 CCKARP32238 428 aa14.07□□□□□ -0.16
SS18-211ENST00000578954 GBX2P52951 348 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms