RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 LZICQ8WZA0 190 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 ZNF48Q96MX3 618 aaPredicted RBP7.52□□□□□ -1.21
GGA3-207ENST00000578896 ZNF570Q96NI8 536 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 TSSK2Q96PF2 358 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 SYT4Q9H2B2 425 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 WDR76Q9H967 626 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 VIPAS39Q9H9C1 493 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 PATZ1Q9HBE1 687 aaKnown RBP7.52□□□□□ -1.21
GGA3-207ENST00000578896 PLEK2Q9NYT0 353 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 ASH2LQ9UBL3 628 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 ZDHHC8Q9ULC8 765 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 NDRG4Q9ULP0 352 aaKnown RBP7.52□□□□□ -1.21
GGA3-207ENST00000578896 IER3IP1Q9Y5U9 82 aa7.52□□□□□ -1.21
GGA3-207ENST00000578896 MEGF8Q7Z7M0 2845 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 SOCS2O14508 198 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 XKRYO14609 159 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 RER1O15258 196 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 KCNAB3O43448 404 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 ICMTO60725 284 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 PTP4A3O75365 173 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 CYB5R3P00387 301 aaPredicted RBP7.51□□□□□ -1.21
GGA3-207ENST00000578896 COX4I1P13073 169 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 SELEP16581 610 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 GSTM3P21266 225 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 FPR2P25090 351 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 LIPAP38571 399 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 CDKN2AP42771 156 aaKnown RBP7.51□□□□□ -1.21
GGA3-207ENST00000578896 SLC6A9P48067 706 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 GSK3BP49841 420 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 BTG1P62324 171 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 SCRN3Q0VDG4 424 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 ZNF154Q13106 437 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 KRR1Q13601 381 aaKnown RBP7.51□□□□□ -1.21
GGA3-207ENST00000578896 FAM205BPQ63HN1 556 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 CORO6Q6QEF8 472 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 ARL9Q6T311 187 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 PTCHD4Q6ZW05 846 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 CBLL1Q75N03 491 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 RRM2BQ7LG56 351 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 FAM122BQ7Z309 247 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 LRRC28Q86X40 367 aaPredicted RBP7.51□□□□□ -1.21
GGA3-207ENST00000578896 TREML1Q86YW5 311 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 ZNF283Q8N7M2 679 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 C19orf18Q8NEA5 215 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 OR10AD1Q8NGE0 317 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 OR52J3Q8NH60 311 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 FNDC8Q8TC99 324 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 SLC7A13Q8TCU3 470 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 PTP4A1Q93096 173 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 HAVCR1Q96D42 359 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 SAMD8Q96LT4 415 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 C1orf147Q96MC9 270 aaPredicted RBP7.51□□□□□ -1.21
GGA3-207ENST00000578896 OR2V2Q96R30 315 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 SIGLEC11Q96RL6 698 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 JMJD8Q96S16 334 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 DIRC2Q96SL1 478 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 GPA33Q99795 319 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 NUAK2Q9H093 628 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 NMNAT1Q9HAN9 279 aaPredicted RBP7.51□□□□□ -1.21
GGA3-207ENST00000578896 DDX28Q9NUL7 540 aaKnown RBP7.51□□□□□ -1.21
GGA3-207ENST00000578896 TBCCD1Q9NVR7 557 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 PPP1R3CQ9UQK1 317 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 AUP1Q9Y679 476 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 TGP01266 2768 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 NOTCH1P46531 2555 aa7.51□□□□□ -1.21
GGA3-207ENST00000578896 TRBV4-1A0A0J9YWV2 114 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 MDFIC2A0A1B0GVS7 189 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 DNAJC9-AS1A6NH13 148 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 CEACAM18A8MTB9 384 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 F5H5P2 479 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 TMEM178BH3BS89 294 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 DCTN6O00399 190 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 KHDRBS3O75525 346 aaKnown RBP7.5□□□□□ -1.21
GGA3-207ENST00000578896 IGHV4-38-2P0DP08 117 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 COX5BP10606 129 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 ZNF12P17014 697 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 KITLGP21583 273 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 TNFSF4P23510 183 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 GATA3P23771 443 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 CD80P33681 288 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 PMELP40967 661 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 LIMS1P48059 325 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 MMP16P51512 607 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 FXYD6P3P58550 94 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 SEC23BQ15437 767 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 ARMCX4Q5H9R4 360 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 FGD3Q5JSP0 725 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 TMPRSS11FQ6ZWK6 438 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 SYT9Q86SS6 491 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 MOGAT3Q86VF5 341 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 RNF113BQ8IZP6 322 aaKnown RBP7.5□□□□□ -1.21
GGA3-207ENST00000578896 KLHL36Q8N4N3 616 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 SPICQ8N5J4 248 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 TEX29Q8N6K0 151 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 FAM86B1Q8N7N1 296 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 NPEPL1Q8NDH3 523 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 BHLHE23Q8NDY6 225 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 OR1F12Q8NHA8 337 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 FAM162AQ96A26 154 aa7.5□□□□□ -1.21
GGA3-207ENST00000578896 TMEM165Q9HC07 324 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms