RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 TMIGD3P0DMS9 266 aaPredicted RBP8.96□□□□□ -0.98
SS18-207ENST00000577636 EDNRAP25101 427 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 SHC1P29353 583 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 OPRM1P35372 400 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 CRYBB2P43320 205 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 ENTPD1P49961 510 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 RORCP51449 518 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 OR12D2P58182 307 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 B3GALT5-AS1P59052 145 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 SIRPAP78324 504 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 ROR2Q01974 943 aaKnown RBP8.96□□□□□ -0.98
SS18-207ENST00000577636 EGR3Q06889 387 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 SF3B4Q15427 424 aaKnown RBP eCLIP8.96□□□□□ -0.984e-8■■■□□ 18.5
SS18-207ENST00000577636 ZNF404Q494X3 552 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 NSUN5P2Q63ZY6 315 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 ARL9Q6T311 187 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 CHMP1BQ7LBR1 199 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 GLB1L2Q8IW92 636 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 TIGD4Q8IY51 512 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 UBQLNLQ8IYU4 475 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 ZFP41Q8N8Y5 198 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 C9orf106Q8NAJ2 232 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 NOXO1Q8NFA2 376 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 OR6N1Q8NGY5 312 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 S100ZQ8WXG8 99 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 AP3S1Q92572 193 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 CPNE4Q96A23 557 aaPredicted RBP8.96□□□□□ -0.98
SS18-207ENST00000577636 INTS12Q96CB8 462 aaKnown RBP8.96□□□□□ -0.98
SS18-207ENST00000577636 TXNDC15Q96J42 360 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 COX4I2Q96KJ9 171 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 DACH2Q96NX9 599 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 KCNK17Q96T54 332 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 ZNF649Q9BS31 505 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 MMP27Q9H306 513 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 MARCH7Q9H992 704 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 UBTD1Q9HAC8 227 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 HMG20AQ9NP66 347 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 TXNL4BQ9NX01 149 aaKnown RBP8.96□□□□□ -0.98
SS18-207ENST00000577636 CRNNQ9UBG3 495 aaPredicted RBP8.96□□□□□ -0.98
SS18-207ENST00000577636 A3GALT2U3KPV4 340 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 RTTNQ86VV8 2226 aa8.96□□□□□ -0.98
SS18-207ENST00000577636 EXPH5Q8NEV8 1989 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 A0A0J9YW62 118 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 TRBV2A0A0J9YWF9 115 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 A0A1W2PPL8 197 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 SLC35F4A4IF30 521 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 DCTN6O00399 190 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 ZNF593O00488 134 aaPredicted RBP8.95□□□□□ -0.98
SS18-207ENST00000577636 PLPP2O43688 288 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 ACTL6AO96019 429 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 IL1AP01583 271 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 CD1AP06126 327 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 CTLA4P16410 223 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 FGF9P31371 208 aaPredicted RBP8.95□□□□□ -0.98
SS18-207ENST00000577636 CD79BP40259 229 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 EIF1AXP47813 144 aaKnown RBP8.95□□□□□ -0.98
SS18-207ENST00000577636 CSNK1A1P48729 337 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 TGM4P49221 684 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 HCCSP53701 268 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 CLDN17P56750 224 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 RPS25P62851 125 aaKnown RBP8.95□□□□□ -0.98
SS18-207ENST00000577636 H3F3AP84243 136 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 SORDQ00796 357 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 SRYQ05066 204 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 SLC3A1Q07837 685 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 FOXF2Q12947 444 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 C22orf42Q6IC83 251 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 PLXDC2Q6UX71 529 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 DPY19L4Q7Z388 723 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 KRT77Q7Z794 578 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.95□□□□□ -0.98
SS18-207ENST00000577636 OR9K2Q8NGE7 335 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 OTOSQ8NHW6 89 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 SMAP2Q8WU79 429 aaPredicted RBP8.95□□□□□ -0.98
SS18-207ENST00000577636 ZNRF4Q8WWF5 429 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 ABTB1Q969K4 478 aaPredicted RBP8.95□□□□□ -0.98
SS18-207ENST00000577636 WDYHV1Q96HA8 205 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 EMC6Q9BV81 110 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 MROQ9BYG7 248 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 TTTY10Q9BZA0 68 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 B3GAT2Q9NPZ5 323 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 KLHL9Q9P2J3 617 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 B3GAT1Q9P2W7 334 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 NDRG3Q9UGV2 375 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 KCNG2Q9UJ96 466 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 COA3Q9Y2R0 106 aaPredicted RBP8.95□□□□□ -0.98
SS18-207ENST00000577636 POLR1DQ9Y2S0 133 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 FN1P02751 2386 aaKnown RBP8.95□□□□□ -0.98
SS18-207ENST00000577636 ARHGAP21Q5T5U3 1957 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 KIAA1549Q9HCM3 1950 aa8.95□□□□□ -0.98
SS18-207ENST00000577636 FLNAP21333 2647 aaKnown RBP8.94□□□□□ -0.98
SS18-207ENST00000577636 HEATR5AQ86XA9 2040 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 CD8B2A6NJW9 211 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 GABRPO00591 440 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 TRAF3IP2O43734 574 aaPredicted RBP8.94□□□□□ -0.98
SS18-207ENST00000577636 CXCL13O43927 109 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 ARL6IP5O75915 188 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 AQP8O94778 261 aa8.94□□□□□ -0.98
SS18-207ENST00000577636 ZNF432O94892 652 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms