RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 NKX3-1Q99801 234 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 PIGQQ9BRB3 760 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 PLEKHA1Q9HB21 404 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 MCUBQ9NWR8 336 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 FAM206AQ9NX38 181 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 RBMX2Q9Y388 322 aaKnown RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 LHFPL6Q9Y693 200 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 R4GN57 208 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 LOC101059948A0A1B0GTJ6 334 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 TTLL8A6PVC2 850 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 CDX4O14627 284 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 EIF1BO60739 113 aaKnown RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 ECDO95905 644 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 ZNF17P17021 662 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 IGFBP3P17936 291 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 MRPS15P82914 257 aaKnown RBP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 HIST3H3Q16695 136 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 ESX1Q8N693 406 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 OR10S1Q8NGN2 331 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 CAPSLQ8WWF8 208 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 AKAP1Q92667 903 aaKnown RBP eCLIP12.48□□□□□ -0.41
VPS33B-208ENST00000574755 FAM3DQ96BQ1 224 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 P4HTMQ9NXG6 502 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 ASH2LQ9UBL3 628 aa12.48□□□□□ -0.41
VPS33B-208ENST00000574755 ZNF878C9JN71 531 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 HSD11B1P28845 292 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 AVPR2P30518 371 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 AP3S2P59780 193 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 CSNK2A1P68400 391 aaPredicted RBP12.47□□□□□ -0.41
VPS33B-208ENST00000574755 C2orf76Q3KRA6 126 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 ACER2Q5QJU3 275 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 LUZP2Q86TE4 346 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 PHF21AQ96BD5 680 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 LIN37Q96GY3 246 aaPredicted RBP12.47□□□□□ -0.41
VPS33B-208ENST00000574755 OR2B2Q9GZK3 357 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 KCNK15Q9H427 330 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 CNTRLQ7Z7A1 2325 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 A0A0A6YYJ9 748 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 A0A0G2JMM0 328 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 LOC100289279A0A1B0GTE1 492 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 A0A1W2PPB8 328 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 A0A1W2PRS3 328 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 DCDC2BA2VCK2 349 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 KIR3DP1A8MWS1 328 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 NPIPA2E9PIF3 369 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 NPIPA3F8WFD2 350 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 ACOT7O00154 380 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 TNFSF11O14788 317 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 XRCC3O43542 346 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 LMX1BO60663 402 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 TTRP02766 147 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 DCTDP32321 178 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 MNDAP41218 407 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 EFNB2P52799 333 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 RAC1P63000 192 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 GABREP78334 506 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 GLYATL3Q5SZD4 288 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 ANKRD16Q6P6B7 361 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 OR51A2Q8NGJ7 313 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 UCN2Q96RP3 112 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 PBOV1Q9GZY1 135 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 ING3Q9NXR8 418 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 FOXJ2Q9P0K8 574 aa12.47□□□□□ -0.41
VPS33B-208ENST00000574755 KIAA1549Q9HCM3 1950 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 CTAG2O75638 210 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 GLSO94925 669 aaPredicted RBP12.46□□□□□ -0.41
VPS33B-208ENST00000574755 SERPINA7P05543 415 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 ACSM4P0C7M7 580 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 NR2C1P13056 603 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 HTR2CP28335 458 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 SPOCK1Q08629 439 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 TAF13Q15543 124 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 TMEM164Q5U3C3 297 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 CREB3L2Q70SY1 520 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 OR6N1Q8NGY5 312 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 OR14L1PQ8NHC6 308 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 NAA11Q9BSU3 229 aaPredicted RBP12.46□□□□□ -0.41
VPS33B-208ENST00000574755 DIABLOQ9NR28 239 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 GLTPQ9NZD2 209 aa12.46□□□□□ -0.41
VPS33B-208ENST00000574755 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.41
VPS33B-208ENST00000574755 PCSK5Q92824 1860 aa12.46□□□□□ -0.42
VPS33B-208ENST00000574755 MEGF11A6BM72 1044 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 GGT3PA6NGU5 568 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 GJE1A6NN92 205 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 VAMP5O95183 116 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 SDHBP21912 280 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 OC90Q02509 493 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-208ENST00000574755 FAM166AQ6J272 317 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 H3F3CQ6NXT2 135 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 ELMOD2Q8IZ81 293 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 JAGN1Q8N5M9 183 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF385AQ96PM9 386 aaKnown RBP12.45□□□□□ -0.42
VPS33B-208ENST00000574755 SPRY4Q9C004 299 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 HRASLSQ9HDD0 168 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 RYDENQ9NUL5 291 aaKnown RBP12.45□□□□□ -0.42
VPS33B-208ENST00000574755 NCKAP5O14513 1909 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 A0A0J9YW62 118 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 RER1O15258 196 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 SYT7O43581 403 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 GMDSO60547 372 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms