RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 F2RP25116 425 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 SHC1P29353 583 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 PRKAR2BP31323 418 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 ARL2P36404 184 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 MDH2P40926 338 aaKnown RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 RBM34P42696 430 aaKnown RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 PRLHRP49683 370 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 P2RY4P51582 365 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 RND2P52198 227 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 CRIP2P52943 208 aaPredicted RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 VSX2P58304 361 aaPredicted RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 TAS2R39P59534 338 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 UBE2KP61086 200 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 RPL31P62899 125 aaKnown RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 UBE2IP63279 158 aaKnown RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 C2orf80Q0P641 193 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 ST3GAL4Q11206 333 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 ARFRP1Q13795 201 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 PRPSAP1Q14558 356 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 TAL2Q16559 108 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 GSG1Q2KHT4 349 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 C5orf47Q569G3 176 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 LCE5AQ5TCM9 118 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 PTRHD1Q6GMV3 140 aaKnown RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 LCN12Q6JVE5 192 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 FAAP20Q6NZ36 180 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 C18orf65Q6ZTR6 163 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 HSD17B13Q7Z5P4 300 aaPredicted RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 OAFQ86UD1 273 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 CRLF3Q8IUI8 442 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 CBLN2Q8IUK8 224 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 FBXO16Q8IX29 292 aaPredicted RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 FAM71AQ8IYT1 594 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 CBR4Q8N4T8 237 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 ZFP41Q8N8Y5 198 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 DNAAF3Q8N9W5 541 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 WDR31Q8NA23 367 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 OR52E2Q8NGJ4 325 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 OR6Q1Q8NGQ2 317 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 OR2L8Q8NGY9 312 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 OR2G3Q8NGZ4 309 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 OR8U1Q8NH10 309 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 FANK1Q8TC84 345 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 OR51E1Q8TCB6 317 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 GEMIN6Q8WXD5 167 aaKnown RBP1.59□□□□□ -2.15
CHD3-217ENST00000574022 FAM122AQ96E09 287 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 VSIG2Q96IQ7 327 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 B3GALT6Q96L58 329 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 FCRL1Q96LA6 429 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 SMIM14Q96QK8 99 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 KIR2DL4Q99706 377 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 ZNF251Q9BRH9 671 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 BEX2Q9BXY8 128 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 ANGPTL4Q9BY76 406 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 KRTAP9-3Q9BYQ3 159 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 SRMSQ9H3Y6 488 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 REEP1Q9H902 201 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 SLC25A22Q9H936 323 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 TMBIM4Q9HC24 238 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 C6orf50Q9HD87 102 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 SH2D2AQ9NP31 389 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 SIRT7Q9NRC8 400 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 RMND1Q9NWS8 449 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 SDHAF2Q9NX18 166 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 MARCH5Q9NX47 278 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 CD274Q9NZQ7 290 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 CLCF1Q9UBD9 225 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 PROCRQ9UNN8 238 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 VSIG4Q9Y279 399 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 FADS3Q9Y5Q0 445 aa1.59□□□□□ -2.15
CHD3-217ENST00000574022 PUS1Q9Y606 427 aaKnown RBP eCLIP1.59□□□□□ -2.15
CHD3-217ENST00000574022 GAKO14976 1311 aa1.59□□□□□ -2.16
CHD3-217ENST00000574022 PHF3Q92576 2039 aaKnown RBP1.58□□□□□ -2.16
CHD3-217ENST00000574022 TRAV8-7A0A075B6U6 113 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 A0A1W2PPR1 153 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 NCBP2LA6PVI3 153 aaKnown RBP1.58□□□□□ -2.16
CHD3-217ENST00000574022 SYCE1LA8MT33 242 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 ANKRD65E5RJM6 399 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 MKRN2OSH3BPM6 223 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 DFFAO00273 331 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 GABRPO00591 440 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 ITGB1BP1O14713 200 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 SLC31A2O15432 143 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 ENSAO43768 121 aaKnown RBP1.58□□□□□ -2.16
CHD3-217ENST00000574022 CDC40O60508 579 aaKnown RBP eCLIP1.58□□□□□ -2.16
CHD3-217ENST00000574022 SLC16A7O60669 478 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 ZG16O60844 167 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 ALOX12BO75342 701 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 SERF1AO75920 110 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 KLHL2O95198 593 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 TNFAIP8O95379 198 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 BRI3O95415 125 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 PTTG1O95997 202 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 GCGP01275 180 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 GLAP06280 429 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 EIF4EP06730 217 aaKnown RBP1.58□□□□□ -2.16
CHD3-217ENST00000574022 CSF3P09919 207 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 RD3LP0DJH9 198 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 GIMD1P0DJR0 217 aa1.58□□□□□ -2.16
CHD3-217ENST00000574022 OR5H8P0DN80 308 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms