RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 REG4Q9BYZ8 158 aa7.86□□□□□ -1.15
NDE1-207ENST00000573203 PRRG3Q9BZD7 231 aa7.86□□□□□ -1.15
NDE1-207ENST00000573203 NOX3Q9HBY0 568 aa7.86□□□□□ -1.15
NDE1-207ENST00000573203 MRPS18AQ9NVS2 196 aaKnown RBP7.86□□□□□ -1.15
NDE1-207ENST00000573203 TMEM38BQ9NVV0 291 aa7.86□□□□□ -1.15
NDE1-207ENST00000573203 PAK1IP1Q9NWT1 392 aaPredicted RBP7.86□□□□□ -1.15
NDE1-207ENST00000573203 CLN6Q9NWW5 311 aa7.86□□□□□ -1.15
NDE1-207ENST00000573203 IMPAD1Q9NX62 359 aa7.86□□□□□ -1.15
NDE1-207ENST00000573203 FBXL3Q9UKT7 428 aa7.86□□□□□ -1.15
NDE1-207ENST00000573203 TMEM5Q9Y2B1 443 aa7.86□□□□□ -1.15
NDE1-207ENST00000573203 HIF3AQ9Y2N7 669 aa7.86□□□□□ -1.15
NDE1-207ENST00000573203 CR1P17927 2039 aa7.86□□□□□ -1.15
NDE1-207ENST00000573203 NSD1Q96L73 2696 aaPredicted RBP7.85□□□□□ -1.15
NDE1-207ENST00000573203 SNTNA6NMZ2 147 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 EFCAB9A8MZ26 197 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 CENPBD1B2RD01 187 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 PTGES3LE9PB15 166 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 AHCYL1O43865 530 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 XPNPEP2O43895 674 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 HMGN1P05114 100 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 CDK1P06493 297 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 PATE4P0C8F1 98 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 NR2C1P13056 603 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 ZNF14P17017 642 aaPredicted RBP7.85□□□□□ -1.15
NDE1-207ENST00000573203 NPR2P20594 1047 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 THBS4P35443 961 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 EFNA4P52798 201 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 DSCR9P59020 149 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 CTXN1P60606 82 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 PRKCDQ05655 676 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 SNTB2Q13425 540 aaKnown RBP7.85□□□□□ -1.15
NDE1-207ENST00000573203 LSAMPQ13449 338 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 ADIPOQQ15848 244 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 HIST3H3Q16695 136 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 ARMC4Q5T2S8 1044 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 UBE2UQ5VVX9 321 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 TMEM53Q6P2H8 277 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 LYPD4Q6UWN0 246 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 PTCHD4Q6ZW05 846 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 OAFQ86UD1 273 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 IGFN1Q86VF2 1251 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 MEX3DQ86XN8 651 aaKnown RBP7.85□□□□□ -1.15
NDE1-207ENST00000573203 SKA3Q8IX90 412 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 OR51A7Q8NH64 312 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 RAB2BQ8WUD1 216 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 RORBQ92753 470 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 GGHQ92820 318 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 UBE2FQ969M7 185 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 SH3GL3Q99963 347 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 VRK1Q99986 396 aaPredicted RBP7.85□□□□□ -1.15
NDE1-207ENST00000573203 TEX12Q9BXU0 123 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 MRPL13Q9BYD1 178 aaKnown RBP7.85□□□□□ -1.15
NDE1-207ENST00000573203 RACGAP1Q9H0H5 632 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 TXNIPQ9H3M7 391 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 ZNF442Q9H7R0 627 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 RNF121Q9H920 327 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 ZNF224Q9NZL3 707 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 SPEF1Q9Y4P9 236 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 FKBP7Q9Y680 259 aa7.85□□□□□ -1.15
NDE1-207ENST00000573203 IGHV4-30-2A0A087WSY4 118 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 TRAV27A0A087WT01 109 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 IRGMA1A4Y4 181 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 NPIPB13A6NJU9 1138 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 NPIPB4C9JG80 1138 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 H3BN98 237 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 FAM20BO75063 409 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 SLC2A10O95528 541 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 SERPINA5P05154 406 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 CSF3P09919 207 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 NR4A1P22736 598 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 FMO3P31513 532 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 GPR4P46093 362 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 SLC9A3P48764 834 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 RPL27P61353 136 aaKnown RBP7.84□□□□□ -1.15
NDE1-207ENST00000573203 GALK2Q01415 458 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 IRF3Q14653 427 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 GINS1Q14691 196 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 EFNB3Q15768 340 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 TBCEQ15813 527 aaPredicted RBP7.84□□□□□ -1.15
NDE1-207ENST00000573203 ANKDD1AQ495B1 522 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 SLC36A2Q495M3 483 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 SLC27A4Q6P1M0 643 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 DNM1P46Q6ZS02 220 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 LINC00299Q6ZSB3 139 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 SLC16A14Q7RTX9 510 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 DPPA2Q7Z7J5 298 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 ANKRD13BQ86YJ7 626 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 LRRC18Q8N456 261 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 ZNF525Q8N782 197 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 OR13C2Q8NGS9 318 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 FGFBP3Q8TAT2 258 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 FAM168AQ92567 244 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 NSMAFQ92636 917 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 ZNF75AQ96N20 296 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 SORCS2Q96PQ0 1159 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 TNFRSF13CQ96RJ3 184 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 GPA33Q99795 319 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 COPS4Q9BT78 406 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 NDEL1Q9GZM8 345 aa7.84□□□□□ -1.15
NDE1-207ENST00000573203 KCNN2Q9H2S1 579 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms