RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 THBS2P35442 1172 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 RBMXP38159 391 aaKnown RBP14.71□□□□□ -0.05
SMG6-212ENST00000573153 CRYBB2P43320 205 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 GPR6P46095 362 aaPredicted RBP14.71□□□□□ -0.05
SMG6-212ENST00000573153 TMEM33P57088 247 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 HIST1H3AP68431 136 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 GK3PQ14409 553 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 CR1LQ2VPA4 569 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 CCDC92Q53HC0 331 aaPredicted RBP14.71□□□□□ -0.05
SMG6-212ENST00000573153 HIST2H3PS2Q5TEC6 136 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 HIST2H3AQ71DI3 136 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 ZBTB46Q86UZ6 589 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 SPATA3Q8NHX4 192 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 SNX33Q8WV41 574 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 SLC7A6Q92536 515 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 SAMD8Q96LT4 415 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 TSSK2Q96PF2 358 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 BTBD10Q9BSF8 475 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 IL20Q9NYY1 176 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 CDH10Q9Y6N8 788 aa14.71□□□□□ -0.05
SMG6-212ENST00000573153 STAB1Q9NY15 2570 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 J3QW42 95 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 TNFRSF11BO00300 401 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 ACOT8O14734 319 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 DOK2O60496 412 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 DEAF1O75398 565 aaPredicted RBP14.7□□□□□ -0.06
SMG6-212ENST00000573153 MT-ND5P03915 603 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 HIST1H1CP16403 213 aaKnown RBP14.7□□□□□ -0.06
SMG6-212ENST00000573153 GCH1P30793 250 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 LIPAP38571 399 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 ERFP50548 548 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 ARHGDIAP52565 204 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 PPP1CBP62140 327 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 TRAP1Q12931 704 aaKnown RBP14.7□□□□□ -0.06
SMG6-212ENST00000573153 FAM209AQ5JX71 171 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 TMEM154Q6P9G4 183 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 OR6V1Q8N148 313 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 LINC01356Q8N9X3 169 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 NPEPL1Q8NDH3 523 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 ICA1LQ8NDH6 482 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 ABHD4Q8TB40 342 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 DDOQ99489 341 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 IFT27Q9BW83 186 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 BEX2Q9BXY8 128 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 SHARPINQ9H0F6 387 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 CYSLTR2Q9NS75 346 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 ASH2LQ9UBL3 628 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 B9D1Q9UPM9 204 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 LHFPL6Q9Y693 200 aa14.7□□□□□ -0.06
SMG6-212ENST00000573153 BHLHE40O14503 412 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 PHF1O43189 567 aaPredicted RBP14.69□□□□□ -0.06
SMG6-212ENST00000573153 CDC14BO60729 498 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 RENP00797 406 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 HOXB6P17509 224 aaKnown RBP14.69□□□□□ -0.06
SMG6-212ENST00000573153 HTR5AP47898 357 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 DVL1P1P54792 670 aaPredicted RBP14.69□□□□□ -0.06
SMG6-212ENST00000573153 RSPO1Q2MKA7 263 aaPredicted RBP14.69□□□□□ -0.06
SMG6-212ENST00000573153 KRTAP27-1Q3LI81 207 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 KRTAP24-1Q3LI83 254 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 FAM98BQ52LJ0 330 aaKnown RBP14.69□□□□□ -0.06
SMG6-212ENST00000573153 OR2T5Q6IEZ7 315 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 LEG1Q6P5S2 330 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 Q6ZR03 302 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 RASSF6Q6ZTQ3 369 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 TRPM8Q7Z2W7 1104 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 JAZF1Q86VZ6 243 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 SLC26A10Q8NG04 563 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 OR9Q2Q8NGE9 314 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 OR2T29Q8NH02 315 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 COG8Q96MW5 612 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 DCLRE1CQ96SD1 692 aaKnown RBP14.69□□□□□ -0.06
SMG6-212ENST00000573153 NMNAT3Q96T66 252 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 DGCR6LQ9BY27 220 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 DCAF16Q9NXF7 216 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 VNN3Q9NY84 501 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 PLEK2Q9NYT0 353 aa14.69□□□□□ -0.06
SMG6-212ENST00000573153 UBOX5O94941 541 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 CCNB2O95067 398 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 ABHD16AO95870 558 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 CD55P08174 381 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 RAP2AP10114 183 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 ZNF81P51508 661 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 SRSF2Q01130 221 aaKnown RBP14.68□□□□□ -0.06
SMG6-212ENST00000573153 COX10Q12887 443 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 PSG7Q13046 419 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 MEP1BQ16820 701 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 ZNF362Q5T0B9 420 aaPredicted RBP14.68□□□□□ -0.06
SMG6-212ENST00000573153 USP51Q70EK9 711 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 GJC3Q8NFK1 279 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 OR4K13Q8NH42 304 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 OR1F12Q8NHA8 337 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 NARFLQ9H6Q4 476 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 TREM2Q9NZC2 230 aa14.68□□□□□ -0.06
SMG6-212ENST00000573153 IGHV1-69-2A0A0G2JMI3 117 aa14.67□□□□□ -0.06
SMG6-212ENST00000573153 OR6C68A6NDL8 312 aa14.67□□□□□ -0.06
SMG6-212ENST00000573153 AQP12BA6NM10 295 aa14.67□□□□□ -0.06
SMG6-212ENST00000573153 RER1O15258 196 aa14.67□□□□□ -0.06
SMG6-212ENST00000573153 GASTP01350 101 aa14.67□□□□□ -0.06
SMG6-212ENST00000573153 TFP02787 698 aa14.67□□□□□ -0.06
SMG6-212ENST00000573153 DBHP09172 617 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms