RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 SLC37A1P57057 533 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 DCAF7P61962 342 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 PPIAP62937 165 aaKnown RBP9.67□□□□□ -0.86
CCDC40-207ENST00000572253 KCTD9Q7L273 389 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 SVBPQ8N300 66 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 FAM160A2Q8N612 972 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF75AQ96N20 296 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 CDCA3Q99618 268 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-207ENST00000572253 VSX1Q9NZR4 365 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-207ENST00000572253 CLDN16Q9Y5I7 305 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 MRPS18BQ9Y676 258 aaKnown RBP9.67□□□□□ -0.86
CCDC40-207ENST00000572253 IGLV1-36A0A0B4J1U3 117 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 RAB19A4D1S5 217 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 FITM1A5D6W6 292 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 ABCD4O14678 606 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF735P0CB33 412 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 IGFBP3P17936 291 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-207ENST00000572253 POLR2HP52434 150 aaKnown RBP9.67□□□□□ -0.86
CCDC40-207ENST00000572253 FJX1Q86VR8 437 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 GTPBP8Q8N3Z3 284 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-207ENST00000572253 MRPL22Q9NWU5 206 aaKnown RBP9.67□□□□□ -0.86
CCDC40-207ENST00000572253 MLXQ9UH92 298 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 OR52A1Q9UKL2 312 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 MMACHCQ9Y4U1 282 aa9.67□□□□□ -0.86
CCDC40-207ENST00000572253 MAP1BP46821 2468 aaKnown RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 TMED7-TICAM2A0A0A6YYA0 188 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 STK17BO94768 372 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 CTLA4P16410 223 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 CD1CP29017 333 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 GNALP38405 381 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 CASRP41180 1078 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 ATP1B3P54709 279 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 INSM1Q01101 510 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 C1QL3Q5VWW1 255 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 OR10K2Q6IF99 312 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 CHRDL2Q6WN34 429 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 SPAG16Q8N0X2 631 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 OR13C8Q8NGS7 320 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF519Q8TB69 540 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 C8orf44Q96CB5 159 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 SLC2A8Q9NY64 477 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 KLK13Q9UKR3 277 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 TMED7Q9Y3B3 224 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 TCRBV21S2A2A0A5A6 115 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 A6NIZ1 184 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 EEF1E1-BLOC1S5C9J1V9 151 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 H0YIG0 161 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 THEGLP0DJG4 465 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 TPT1P13693 172 aaKnown RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 ZBTB25P24278 435 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 ARRB1P49407 418 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 TAS2R31P59538 309 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 RAP1BP61224 184 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 RAP1AP62834 184 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 MRPS21P82921 87 aaKnown RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 PLCXD2Q0VAA5 305 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 PPP1R1AQ13522 171 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 C1orf100Q5SVJ3 147 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 FAHD2BQ6P2I3 314 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 HAGHLQ6PII5 290 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 FAHD2AQ96GK7 314 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 VSIG4Q9Y279 399 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 TMEM269A0A1B0GVZ9 245 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 C9orf170A2RU37 121 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 A8MVM7 634 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 SOX1O00570 391 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 OR2T1O43869 369 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 CLPSP04118 112 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 H2BFMP0C1H6 154 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 CYCSP99999 105 aaKnown RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 C1orf140Q5VVS0 124 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 KLHL24Q6TFL4 600 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 MARCH3Q86UD3 253 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 OR4S1Q8NGB4 309 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 OR51A2Q8NGJ7 313 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 MITD1Q8WV92 249 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 ARL11Q969Q4 196 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 CDC6Q99741 560 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 SAV1Q9H4B6 383 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 NDRG3Q9UGV2 375 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 PURGQ9UJV8 347 aaKnown RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 GDF2Q9UK05 429 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 PCDHB10Q9UN67 800 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 COA3Q9Y2R0 106 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-207ENST00000572253 EML5Q05BV3 1969 aa9.66□□□□□ -0.86
CCDC40-207ENST00000572253 FAM74A7A6NL05 159 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 ZNF208O43345 1280 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 SIGLEC6O43699 453 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 ATG12O94817 140 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 HLA-GP17693 338 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 TBPP20226 339 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 BDKRB2P30411 391 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 ARHGDIBP52566 201 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 FAM74A3Q4VXF1 159 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 PTPMT1Q8WUK0 201 aaPredicted RBP9.65□□□□□ -0.86
CCDC40-207ENST00000572253 TMEM106CQ9BVX2 250 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 CST11Q9H112 138 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 PDE7BQ9NP56 450 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 CENPMQ9NSP4 180 aa9.65□□□□□ -0.86
CCDC40-207ENST00000572253 MBD2Q9UBB5 411 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms