RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 COX5AP20674 150 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF84P51523 738 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 PIGFQ07326 219 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 ST3GAL4Q11206 333 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 POU4F2Q12837 409 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 MEP1BQ16820 701 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 CLEC12BQ2HXU8 276 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 TEX30Q5JUR7 227 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 OTPQ5XKR4 325 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF474Q6S9Z5 364 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-209ENST00000571558 SHFQ7M4L6 423 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 SLC16A9Q7RTY1 509 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 GABRG1Q8N1C3 465 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 UBE2J2Q8N2K1 259 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 SMAP2Q8WU79 429 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-209ENST00000571558 C11orf40Q8WZ69 217 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 HTRA1Q92743 480 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 INTS14Q96SY0 518 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 CNN2Q99439 309 aaKnown RBP11.97□□□□□ -0.49
RPAIN-209ENST00000571558 ZNF649Q9BS31 505 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 JAM3Q9BX67 310 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 REG4Q9BYZ8 158 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 OPN3Q9H1Y3 402 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-209ENST00000571558 TMEM38BQ9NVV0 291 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 ERVK-18Q9QC07 812 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 UPB1Q9UBR1 384 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 PROCRQ9UNN8 238 aa11.97□□□□□ -0.49
RPAIN-209ENST00000571558 DIMT1Q9UNQ2 313 aaKnown RBP11.97□□□□□ -0.49
RPAIN-209ENST00000571558 ANK3Q12955 4377 aaKnown RBP11.96□□□□□ -0.49
RPAIN-209ENST00000571558 IRGMA1A4Y4 181 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 KRT33AO76009 404 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 CDK1P06493 297 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 MPGP29372 298 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 CCKARP32238 428 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 NAA10P41227 235 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-209ENST00000571558 CDH15P55291 814 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 ARF1P84077 181 aaKnown RBP11.96□□□□□ -0.49
RPAIN-209ENST00000571558 NRN1LQ496H8 165 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 ABHD12BQ7Z5M8 362 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-209ENST00000571558 ERI1Q8IV48 349 aaKnown RBP11.96□□□□□ -0.49
RPAIN-209ENST00000571558 TRMT61AQ96FX7 289 aaKnown RBP11.96□□□□□ -0.49
RPAIN-209ENST00000571558 TMEM80Q96HE8 168 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 BOD1Q96IK1 185 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 FOXB1Q99853 325 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 NELFAQ9H3P2 528 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 SEC61A2Q9H9S3 476 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 SIAEQ9HAT2 523 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 EMC7Q9NPA0 242 aa11.96□□□□□ -0.49
RPAIN-209ENST00000571558 TRIM64CA6NLI5 447 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 PHF1O43189 567 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-209ENST00000571558 SEC14L2O76054 403 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 RAB36O95755 333 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 FADS2O95864 444 aaKnown RBP11.95□□□□□ -0.5
RPAIN-209ENST00000571558 HLA-DQA2P01906 255 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 FAM157CP0CG43 387 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 NPR2P20594 1047 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 MSR1P21757 451 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 IGHV1-2P23083 117 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 DCKP27707 260 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 C21orf33P30042 268 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-209ENST00000571558 RPS27P42677 84 aaKnown RBP11.95□□□□□ -0.5
RPAIN-209ENST00000571558 ENTPD1P49961 510 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 HCCSP53701 268 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 SH3BGRP55822 239 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-209ENST00000571558 LSM6P62312 80 aaKnown RBP11.95□□□□□ -0.5
RPAIN-209ENST00000571558 ENDOGQ14249 297 aaKnown RBP11.95□□□□□ -0.5
RPAIN-209ENST00000571558 IRF3Q14653 427 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 FAM27BQ5VT28 67 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 RNLSQ5VYX0 342 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 ZNF773Q6PK81 442 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 ZNF704Q6ZNC4 412 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-209ENST00000571558 PRSS48Q7RTY5 328 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 SLC35F2Q8IXU6 374 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 RFLNBQ8N5W9 214 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 ZNF433Q8N7K0 673 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-209ENST00000571558 OTOSQ8NHW6 89 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 MYDGFQ969H8 173 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 CDCA4Q9BXL8 241 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 YIPF3Q9GZM5 350 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 CCNB1IP1Q9NPC3 277 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 CYB5R1Q9UHQ9 305 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 KLHDC2Q9Y2U9 406 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 PCDHGB1Q9Y5G3 927 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 LHFPL6Q9Y693 200 aa11.95□□□□□ -0.5
RPAIN-209ENST00000571558 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-209ENST00000571558 A8MV72 311 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-209ENST00000571558 ZNF593O00488 134 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-209ENST00000571558 HS3ST1O14792 307 aa11.94□□□□□ -0.5
RPAIN-209ENST00000571558 RGS10O43665 173 aa11.94□□□□□ -0.5
RPAIN-209ENST00000571558 MRPS14O60783 128 aaKnown RBP11.94□□□□□ -0.5
RPAIN-209ENST00000571558 MT-ND2P03891 347 aa11.94□□□□□ -0.5
RPAIN-209ENST00000571558 RPSAP08865 295 aaKnown RBP11.94□□□□□ -0.5
RPAIN-209ENST00000571558 OR2T7P0C7T2 308 aa11.94□□□□□ -0.5
RPAIN-209ENST00000571558 LIMS3P0CW19 117 aa11.94□□□□□ -0.5
RPAIN-209ENST00000571558 LIMS4P0CW20 117 aa11.94□□□□□ -0.5
RPAIN-209ENST00000571558 SMIM18P0DKX4 95 aa11.94□□□□□ -0.5
RPAIN-209ENST00000571558 B4GALT1P15291 398 aa11.94□□□□□ -0.5
RPAIN-209ENST00000571558 EEF1B2P24534 225 aaKnown RBP11.94□□□□□ -0.5
RPAIN-209ENST00000571558 THBS2P35442 1172 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms