RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 PDGFRLQ15198 375 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 MOGQ16653 247 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 ZNF630Q2M218 657 aaPredicted RBP3.05□□□□□ -1.92
UBR1-211ENST00000569971 HNRNPA1L2Q32P51 320 aaKnown RBP3.05□□□□□ -1.92
UBR1-211ENST00000569971 ZNF829Q3KNS6 432 aaPredicted RBP3.05□□□□□ -1.92
UBR1-211ENST00000569971 TMEM52BQ4KMG9 183 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 ZNF311Q5JNZ3 666 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 TMEM215Q68D42 235 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 C16orf87Q6PH81 154 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 CBLN3Q6UW01 205 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 ANGPTL8Q6UXH0 198 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 TMIGD1Q6UXZ0 262 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 ZNF562Q6V9R5 426 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 WASH2PQ6VEQ5 465 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 GDPGP1Q6ZNW5 385 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 PAGE2Q7Z2X7 111 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 CCDC71Q8IV32 467 aaPredicted RBP3.05□□□□□ -1.92
UBR1-211ENST00000569971 CLECL1Q8IZS7 167 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 ZNF614Q8N883 585 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 TTC29Q8NA56 475 aaPredicted RBP3.05□□□□□ -1.92
UBR1-211ENST00000569971 AQP11Q8NBQ7 271 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 BPIFB6Q8NFQ5 453 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 OR1B1Q8NGR6 318 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 OR2L2Q8NH16 312 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 PHOSPHO2Q8TCD6 241 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 CXorf40AQ8TE69 158 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 SLC5A11Q8WWX8 675 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 S100ZQ8WXG8 99 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 ING5Q8WYH8 240 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 DLX4Q92988 240 aaPredicted RBP3.05□□□□□ -1.92
UBR1-211ENST00000569971 NEIL2Q969S2 332 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 RAD51AP1Q96B01 352 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 WDR34Q96EX3 536 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 TPD52L3Q96J77 140 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 DUX3Q96PT4 197 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 DOHHQ9BU89 302 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 PCBD2Q9H0N5 130 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 OR2AG1Q9H205 316 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 GPN2Q9H9Y4 310 aaPredicted RBP3.05□□□□□ -1.92
UBR1-211ENST00000569971 HMG20AQ9NP66 347 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 SCRT2Q9NQ03 307 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 MIEF1Q9NQG6 463 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 THYN1Q9P016 225 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 PDP1Q9P0J1 537 aaPredicted RBP3.05□□□□□ -1.92
UBR1-211ENST00000569971 DEC1Q9P2X7 70 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 MBD2Q9UBB5 411 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.05□□□□□ -1.92
UBR1-211ENST00000569971 B9D1Q9UPM9 204 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 ANGPT4Q9Y264 503 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 FAM32AQ9Y421 112 aaKnown RBP3.05□□□□□ -1.92
UBR1-211ENST00000569971 GMEB1Q9Y692 573 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 PLXNB3Q9ULL4 1909 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 PLXNA2O75051 1894 aa3.05□□□□□ -1.92
UBR1-211ENST00000569971 ZFC3H1O60293 1989 aaKnown RBP3.04□□□□□ -1.92
UBR1-211ENST00000569971 DENND4CQ5VZ89 1909 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 A0A1B0GVG6 124 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 MEX3AA1L020 520 aaKnown RBP3.04□□□□□ -1.92
UBR1-211ENST00000569971 GABRR3A8MPY1 467 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 K7EQG2 157 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 TNFRSF11BO00300 401 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 KMOO15229 486 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 GMFGO60234 142 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 MPZL2O60487 215 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 SCN2BO60939 215 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 SDC3O75056 442 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 CLPXO76031 633 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 TOXO94900 526 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 SEMA3DO95025 777 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 SEMG1P04279 462 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 IFNW1P05000 195 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 OR9G9P0C7N8 305 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 ADRB3P13945 408 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 FOSL2P15408 326 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 PSMB9P28065 219 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 RRM2P31350 389 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 SAA4P35542 130 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 RANBP1P43487 201 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 DAPP51397 102 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 PLA2G16P53816 162 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 SMIM11AP58511 58 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 ACTR1AP61163 376 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 SELENOWP63302 87 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 NTHL1P78549 312 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 VLDLRP98155 873 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 CDK6Q00534 326 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 SPIBQ01892 262 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 ZNF846Q147U1 533 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 ARHGAP19Q14CB8 494 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 MAD2L1BPQ15013 274 aaPredicted RBP3.04□□□□□ -1.92
UBR1-211ENST00000569971 ZNF146Q15072 292 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 RGNQ15493 299 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 DGUOKQ16854 277 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 POM121L1PQ3SYA9 428 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 CCSMST1Q4G0I0 132 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 C9orf64Q5T6V5 341 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 KDM4DQ6B0I6 523 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 DMKNQ6E0U4 476 aaPredicted RBP3.04□□□□□ -1.92
UBR1-211ENST00000569971 XAF1Q6GPH4 301 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
UBR1-211ENST00000569971 ANKRD26P1Q6NSI1 321 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms