RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 SEC61A1P61619 476 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 BNIP1Q12981 228 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 CDK5R2Q13319 367 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 KRR1Q13601 381 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 HFEQ30201 348 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 CCDC92Q53HC0 331 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 MTX3Q5HYI7 312 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 C1QL2Q7Z5L3 287 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 FNDC8Q8TC99 324 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 ELMOD3Q96FG2 381 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 ZNF570Q96NI8 536 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 SIGLEC11Q96RL6 698 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 SYT4Q9H2B2 425 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 ESM1Q9NQ30 184 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 NRIP3Q9NQ35 241 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 EIF3KQ9UBQ5 218 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 PURGQ9UJV8 347 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 STARD10Q9Y365 291 aa11.69□□□□□ -0.54
GTF3C1-211ENST00000569653 C12orf71A8MTZ7 269 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 H3BSA7 217 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 ABHD16AO95870 558 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 MT-ND5P03915 603 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 SEMG1P04279 462 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 FABP3P05413 133 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 COX5BP10606 129 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 RPL4P36578 427 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 CDKN2AP42771 156 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 HTR5AP47898 357 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 SMIM11AP58511 58 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 PCBD1P61457 104 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 LCN2P80188 198 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 SPIBQ01892 262 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 TEKQ02763 1124 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 MOGQ16653 247 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 SHQ1Q6PI26 577 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 SYT9Q86SS6 491 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 RAB39BQ96DA2 213 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 RSRC1Q96IZ7 334 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 DHRS1Q96LJ7 313 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 TSSK2Q96PF2 358 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 GPX7Q96SL4 187 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 C1orf21Q9H246 121 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 MMP26Q9NRE1 261 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 TBCCD1Q9NVR7 557 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 VSX1Q9NZR4 365 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 ACTR3BQ9P1U1 418 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 GRHPRQ9UBQ7 328 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 PRPF19Q9UMS4 504 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 COA3Q9Y2R0 106 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 MGAM2Q2M2H8 2515 aa11.68□□□□□ -0.54
GTF3C1-211ENST00000569653 MEGF8Q7Z7M0 2845 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 PLSCR5A0PG75 271 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 HAX1O00165 279 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 SOCS2O14508 198 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 RER1O15258 196 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 SGCEO43556 437 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 SLC16A7O60669 478 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 GADD45GO95257 159 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 KITLGP21583 273 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 ANOS1P23352 680 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 CFPP27918 469 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 HILS1P60008 231 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 TNFAIP6P98066 277 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 HLXQ14774 488 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 MEP1BQ16820 701 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 RSPO1Q2MKA7 263 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 TUSC1Q2TAM9 212 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 CYP2R1Q6VVX0 501 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 ALDH16A1Q8IZ83 802 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 RAB1CQ92928 201 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 POP5Q969H6 163 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 CMBLQ96DG6 245 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 CLPTM1LQ96KA5 538 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 SLC6A7Q99884 636 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 GAL3ST1Q99999 423 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 NUAK2Q9H093 628 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 IL1RAPQ9NPH3 570 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 UBAP1Q9NZ09 502 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 ASH2LQ9UBL3 628 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 ZDHHC8Q9ULC8 765 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 NDRG4Q9ULP0 352 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 IER3IP1Q9Y5U9 82 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 LHFPL6Q9Y693 200 aa11.67□□□□□ -0.54
GTF3C1-211ENST00000569653 A0A0A6YYJ9 748 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 IGLV1-36A0A0B4J1U3 117 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 A0A0G2JMP0 313 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 A0A0X1KG70 313 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 ISPDA4D126 451 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 TIMM8AO60220 97 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 NDUFB2O95178 105 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 TXNDC12O95881 172 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 ATP6V1B2P21281 511 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 SDHAP31040 664 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 PRSS12P56730 875 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 HIST1H3AP68431 136 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 SCRN3Q0VDG4 424 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 ZMYND11Q15326 602 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 HIST2H3PS2Q5TEC6 136 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 DCAF12L2Q5VW00 463 aa11.66□□□□□ -0.54
GTF3C1-211ENST00000569653 LCN8Q6JVE9 175 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms