RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 A0A0J9YYE9 177 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 C1orf232A0A0U1RR37 186 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 A0A1W2PPE3 182 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 NKX2-6A6NCS4 301 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ACOD1A6NK06 481 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ZNF724A8MTY0 619 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 TMCO5BA8MYB1 307 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 C9JVG2 144 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 NPIPB9F8W1W9 429 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 G3V2L1 256 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 G3V4G9 280 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 EIF3HO15372 352 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 SH3BGRLO75368 114 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 STX11O75558 287 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 KLF7O75840 302 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 LRATO95237 230 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 H6PDO95479 791 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 TRBC1P01850 177 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 GAPDHP04406 335 aaKnown RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 UBTFL6P0CB48 400 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 HSMCR30P0CW71 290 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 PPIAL4FP0DN26 164 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ATP1B2P14415 290 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ZNF7P17097 686 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 IDSP22304 550 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 CDH5P33151 784 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 RORAP35398 523 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 SAA4P35542 130 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 TSFMP43897 325 aaKnown RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 CAPZBP47756 277 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 CSNK1DP48730 415 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 POU3F4P49335 361 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 TDGF1P3P51864 188 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 KPNA2P52292 529 aaKnown RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 EFNB2P52799 333 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 TMEM50BP56557 158 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 CSNK1G2P78368 415 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 RBBP4Q09028 425 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 BNIP1Q12981 228 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 GK3PQ14409 553 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ZNF235Q14590 738 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 MESDQ14696 234 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 NCF4Q15080 339 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 UBE2V2Q15819 145 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ZNF239Q16600 458 aaKnown RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 EXOC3L4Q17RC7 722 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 MICBQ29980 383 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 PARP15Q460N3 678 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 TP53I3Q53FA7 332 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 UNC50Q53HI1 259 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 DMRTC1Q5HYR2 192 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 PLCXD3Q63HM9 321 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 TMEM107Q6UX40 140 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 BTNL3Q6UXE8 466 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ADAMTSL5Q6ZMM2 481 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 MOB3BQ86TA1 216 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ZNF547Q8IVP9 402 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 PRSS58Q8IYP2 241 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 FAM71AQ8IYT1 594 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 FAM9CQ8IZT9 166 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 GTPBP8Q8N3Z3 284 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 TRIML2Q8N7C3 387 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ICA1LQ8NDH6 482 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 GPR26Q8NDV2 337 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 FBXO25Q8TCJ0 367 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 TSEN15Q8WW01 171 aaKnown RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ELMO1Q92556 727 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 RAB3CQ96E17 227 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 PRRC1Q96M27 445 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 MCEEQ96PE7 176 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 PEBP4Q96S96 227 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 SLC6A7Q99884 636 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 SOSTQ9BQB4 213 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 SLC30A2Q9BRI3 323 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 DPH7Q9BTV6 452 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 C20orf24Q9BUV8 137 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 SNRNP25Q9BV90 132 aaKnown RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 SPATA16Q9BXB7 569 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 UCK2Q9BZX2 261 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 COMMD4Q9H0A8 199 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 RGCCQ9H4X1 137 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 PLEKHA3Q9HB20 300 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 FAM60AQ9NP50 221 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 IMP3Q9NV31 184 aaKnown RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 RMND1Q9NWS8 449 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 MRPL39Q9NYK5 338 aaKnown RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 TAS2R16Q9NYV7 291 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 IL36GQ9NZH8 169 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 STOX2Q9P2F5 926 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 PSMC3IPQ9P2W1 217 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 EIF3KQ9UBQ5 218 aaKnown RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 EXOSC1Q9Y3B2 195 aaKnown RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 RHBDD3Q9Y3P4 386 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 PPIAL4AQ9Y536 164 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 GTF3C1Q12789 2109 aa2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 ZNF469Q96JG9 3925 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P6-201ENST00000569046 SCN3AQ9NY46 2000 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms