RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 CYB561A3Q8NBI2 242 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 SLC30A7Q8NEW0 376 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 FGFBP3Q8TAT2 258 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 FNDC8Q8TC99 324 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 UBASH3BQ8TF42 649 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 TSSK2Q96PF2 358 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 C9orf16Q9BUW7 83 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 RPRD1BQ9NQG5 326 aaKnown RBP11.07□□□□□ -0.64
TSC2-220ENST00000568238 VSX1Q9NZR4 365 aaPredicted RBP11.07□□□□□ -0.64
TSC2-220ENST00000568238 FZR1Q9UM11 496 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 BAIAP2Q9UQB8 552 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 UGT2A1Q9Y4X1 527 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 ORC6Q9Y5N6 252 aa11.07□□□□□ -0.64
TSC2-220ENST00000568238 A0A1W2PPW3 197 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 LRP5LA4QPB2 252 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 OR6C68A6NDL8 312 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 AHCYL1O43865 530 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 IFNGP01579 166 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 ALPLP05186 524 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 TACSTD2P09758 323 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 HNF1AP20823 631 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 PEX2P28328 305 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 EPHA2P29317 976 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 CENPAP49450 140 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 ZNF133P52736 654 aaPredicted RBP11.06□□□□□ -0.64
TSC2-220ENST00000568238 CHN2P52757 468 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 CRMP1Q14194 572 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 LRRC36Q1X8D7 754 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 NRN1LQ496H8 165 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 LPCAT4Q643R3 524 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 ZBTB49Q6ZSB9 765 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 SLC16A14Q7RTX9 510 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 SLC37A3Q8NCC5 494 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 NPEPL1Q8NDH3 523 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 OR9Q1Q8NGQ5 310 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 OTULINQ96BN8 352 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 SNX18Q96RF0 628 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 SLC29A1Q99808 456 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 NUAK2Q9H093 628 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 C1orf198Q9H425 327 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 RNF121Q9H920 327 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 CDH20Q9HBT6 801 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 SLC25A19Q9HC21 320 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 CMC2Q9NRP2 79 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 USE1Q9NZ43 259 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 NKX1-2Q9UD57 310 aaPredicted RBP11.06□□□□□ -0.64
TSC2-220ENST00000568238 KLHL21Q9UJP4 597 aa11.06□□□□□ -0.64
TSC2-220ENST00000568238 M0R129 80 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 KHDRBS3O75525 346 aaKnown RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 TGFAP01135 160 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 ZNF3P17036 446 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 SRD5A1P18405 259 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 APEX1P27695 318 aaKnown RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 POLR2IP36954 125 aaKnown RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 ALDH3B1P43353 468 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 CDK5Q00535 292 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 RIN1Q13671 783 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 MAD2L1BPQ15013 274 aaPredicted RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 PTGES3Q15185 160 aaKnown RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 SGCAQ16586 387 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 ZIK1Q3SY52 487 aaPredicted RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 FAM120AOSQ5T036 256 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 OTPQ5XKR4 325 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 RGS7BPQ6MZT1 257 aaPredicted RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 DNM1P34Q6PK57 102 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 LRP11Q86VZ4 500 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 PAQR4Q8N4S7 273 aaPredicted RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 TMEM158Q8WZ71 300 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 HPS1Q92902 700 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 PLEKHA8Q96JA3 519 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 TEX12Q9BXU0 123 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 GABARAPL3Q9BY60 117 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 MS4A5Q9H3V2 200 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 DCLRE1BQ9H816 532 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 MED20Q9H944 212 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 SRA1Q9HD15 236 aaKnown RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 TVP23BQ9NYZ1 205 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 MYEF2Q9P2K5 600 aaKnown RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 ENOPH1Q9UHY7 261 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 DUSP13Q9UII6 198 aa11.05□□□□□ -0.64
TSC2-220ENST00000568238 COA3Q9Y2R0 106 aaPredicted RBP11.05□□□□□ -0.64
TSC2-220ENST00000568238 IGLV1-36A0A0B4J1U3 117 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 IQCMA0A1B0GVH7 501 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 FAM183AA6NL82 134 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 LYNX1G3V0Z9 82 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 DCTN6O00399 190 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 SURF4O15260 269 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 PHF1O43189 567 aaPredicted RBP11.04□□□□□ -0.64
TSC2-220ENST00000568238 LILRA1O75019 489 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 SNAP29O95721 258 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 GPANK1O95872 356 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 PTHP01270 115 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 HMGN1P05114 100 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 GYPBP06028 91 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 FAM157BP0CG42 384 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 LYNX1P0DP58 116 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 CCL2P13500 99 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 CRABP1P29762 137 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 PYCR1P32322 319 aa11.04□□□□□ -0.64
TSC2-220ENST00000568238 GUCA1AP43080 201 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms