RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 KRT80Q6KB66 452 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 SLC30A7Q8NEW0 376 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 OR10S1Q8NGN2 331 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 OR1F12Q8NHA8 337 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 SLAMF6Q96DU3 332 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 PLPPR2Q96GM1 343 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 AMELYQ99218 206 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 COQ7Q99807 217 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 ABHD6Q9BV23 337 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 ESRP2Q9H6T0 727 aaKnown RBP13.64□□□□□ -0.23
SPG7-218ENST00000568205 PNRC2Q9NPJ4 139 aaKnown RBP13.64□□□□□ -0.23
SPG7-218ENST00000568205 MRPS18AQ9NVS2 196 aaKnown RBP13.64□□□□□ -0.23
SPG7-218ENST00000568205 ATPIF1Q9UII2 106 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 LAMP5Q9UJQ1 280 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 COPS3Q9UNS2 423 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 EXOGQ9Y2C4 368 aaKnown RBP13.64□□□□□ -0.23
SPG7-218ENST00000568205 TMEM14AQ9Y6G1 99 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 UTP20O75691 2785 aaKnown RBP13.64□□□□□ -0.23
SPG7-218ENST00000568205 PRR14LQ5THK1 2151 aa13.64□□□□□ -0.23
SPG7-218ENST00000568205 COX5BP10606 129 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 STOMP27105 288 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 APLNRP35414 380 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 SLC15A1P46059 708 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 GDI2P50395 445 aaKnown RBP13.63□□□□□ -0.23
SPG7-218ENST00000568205 NR1H2P55055 460 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 NAAAQ02083 359 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 ECH1Q13011 328 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 KLHL22Q53GT1 634 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 SPATC1Q76KD6 591 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 IL17RDQ8NFM7 739 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 BPIFB6Q8NFQ5 453 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 OR10H4Q8NGA5 316 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 THEM6Q8WUY1 208 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 RNF133Q8WVZ7 376 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 ATF6BQ99941 703 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 PLCXD1Q9NUJ7 323 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 DDX28Q9NUL7 540 aaKnown RBP13.63□□□□□ -0.23
SPG7-218ENST00000568205 PCDHGB1Q9Y5G3 927 aa13.63□□□□□ -0.23
SPG7-218ENST00000568205 LOC100509620A0A075B734 347 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 IGHV2OR16-5A0A0B4J2B6 119 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 A6NNC1 897 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 ZNF670-ZNF695F2Z2N8 137 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 J3QRE1 110 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 PHYHO14832 338 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 XPNPEP2O43895 674 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 FAM20BO75063 409 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 GOSR1O95249 250 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 FADS2O95864 444 aaKnown RBP13.62□□□□□ -0.23
SPG7-218ENST00000568205 CRYAAP02489 173 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 CD3EP07766 207 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 OR2T7P0C7T2 308 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 LOXP28300 417 aaPredicted RBP13.62□□□□□ -0.23
SPG7-218ENST00000568205 CXCR4P61073 352 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 CSNK2BP67870 215 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 ACTC1P68032 377 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 ACTA1P68133 377 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 TBC1D28Q2M2D7 210 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 RFLNBQ8N5W9 214 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 OR52I1Q8NGK6 324 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 OR1J2Q8NGS2 313 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 OR2T27Q8NH04 317 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 ASB17Q8WXJ9 295 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 SLC7A6Q92536 515 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 PIK3IP1Q96FE7 263 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 POM121L2Q96KW2 1035 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 TBX5Q99593 518 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 KCNS3Q9BQ31 491 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 RHNO1Q9BSD3 238 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 CDH20Q9HBT6 801 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 CENPMQ9NSP4 180 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 UBAP1Q9NZ09 502 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 PCDHGB5Q9Y5G0 923 aa13.62□□□□□ -0.23
SPG7-218ENST00000568205 HECTD1Q9ULT8 2610 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 A0A1W2PQL4 384 aaPredicted RBP13.61□□□□□ -0.23
SPG7-218ENST00000568205 IRGMA1A4Y4 181 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 EFCAB10A6NFE3 127 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 PRR32B1ATL7 298 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 ZNF878C9JN71 531 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 SLC1A7O00341 560 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 ABCD4O14678 606 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 PIPP12273 146 aaPredicted RBP13.61□□□□□ -0.23
SPG7-218ENST00000568205 CCL2P13500 99 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 CALCRP30988 508 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 OPRL1P41146 370 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 SPOCK1Q08629 439 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 TAF13Q15543 124 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 ZNF322Q6U7Q0 402 aaPredicted RBP13.61□□□□□ -0.23
SPG7-218ENST00000568205 RHOUQ7L0Q8 258 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 PAQR4Q8N4S7 273 aaPredicted RBP13.61□□□□□ -0.23
SPG7-218ENST00000568205 ACBD7Q8N6N7 88 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 GGHQ92820 318 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 HS3ST6Q96QI5 342 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 COPS4Q9BT78 406 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 TTTY10Q9BZA0 68 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 FGF20Q9NP95 211 aaPredicted RBP13.61□□□□□ -0.23
SPG7-218ENST00000568205 CNOT2Q9NZN8 540 aaKnown RBP13.61□□□□□ -0.23
SPG7-218ENST00000568205 PSORS1C1Q9UIG5 152 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 MYRFQ9Y2G1 1151 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 RNF115Q9Y4L5 304 aa13.61□□□□□ -0.23
SPG7-218ENST00000568205 LRRC42Q9Y546 428 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms