RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 SAV1Q9H4B6 383 aaPredicted RBP2.66□□□□□ -1.98
SHCBP1-206ENST00000567698 FBXO44Q9H4M3 255 aa2.66□□□□□ -1.98
SHCBP1-206ENST00000567698 STK38LQ9Y2H1 464 aa2.66□□□□□ -1.98
SHCBP1-206ENST00000567698 AKNAQ7Z591 1439 aa2.66□□□□□ -1.98
SHCBP1-206ENST00000567698 MAP3K19Q56UN5 1328 aa2.66□□□□□ -1.98
SHCBP1-206ENST00000567698 IGLV1-36A0A0B4J1U3 117 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 GLYATL1P3A0A0U1RQE8 302 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 LOC100653049A0A140TA62 436 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 COLCA2A8K830 154 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 CDC7O00311 574 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 RAB29O14966 203 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 EIF3HO15372 352 aaKnown RBP eCLIP2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 KRT34O76011 436 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 OR2F2O95006 317 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 RAB3DO95716 219 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 CLTAP09496 248 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 UBTFL6P0CB48 400 aaPredicted RBP2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 ZNF250P15622 560 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 U2AF2P26368 475 aaKnown RBP eCLIP2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 GPX4P36969 197 aaPredicted RBP2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 NUP62P37198 522 aaPredicted RBP2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 ANP32AP39687 249 aaKnown RBP2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 CSNK1A1P48729 337 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 RAB9AP51151 201 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 RND2P52198 227 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 DAOAP59103 153 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 MERTKQ12866 999 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 ECH1Q13011 328 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 ERCC8Q13216 396 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 TMEM53Q6P2H8 277 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 CENPQQ7L2Z9 268 aaPredicted RBP2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 LUZP2Q86TE4 346 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 ZFP41Q8N8Y5 198 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 FAM81AQ8TBF8 368 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 ACMSDQ8TDX5 336 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 PDXPQ96GD0 296 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 ATP6V1G3Q96LB4 118 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 PRRC1Q96M27 445 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 SERPINB12Q96P63 405 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 SLC29A1Q99808 456 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 NDFIP1Q9BT67 221 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 IQCGQ9H095 443 aaKnown RBP2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 PTTG3PQ9NZH4 202 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 DENND4AQ7Z401 1863 aa2.65□□□□□ -1.99
SHCBP1-206ENST00000567698 LOC100506127A0A0U1RQW1 187 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 ZNF879B4DU55 563 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 ZNF701M0R085 212 aaPredicted RBP2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 GCM2O75603 506 aaPredicted RBP2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 GABARAPO95166 117 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 TGM6O95932 706 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 FTH1P02794 183 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 TROVE2P10155 538 aaKnown RBP eCLIP2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 PRKACAP17612 351 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 PRKACBP22694 351 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 DEKP35659 375 aaKnown RBP2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 TMED10P49755 219 aaKnown RBP2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 ACLYP53396 1101 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 C21orf59P57076 290 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 RAP1AP62834 184 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 ITIH4Q14624 930 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 ZNF726P1Q15940 193 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 MRPL23Q16540 153 aaKnown RBP2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 Q3ZCU0 254 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 DEGS2Q6QHC5 323 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 CERS6Q6ZMG9 384 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 EIF3MQ7L2H7 374 aaKnown RBP2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 LIX1Q8N485 282 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 OR4C5Q8NGB2 326 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 SUN5Q8TC36 379 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 GPX8Q8TED1 209 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 ABHD3Q8WU67 409 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 SEH1LQ96EE3 360 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 TGS1Q96RS0 853 aaKnown RBP2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 SLC25A2Q9BXI2 301 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 RSPO3Q9BXY4 272 aaPredicted RBP2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 OR2AG1Q9H205 316 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 BLZF1Q9H2G9 400 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 RGCCQ9H4X1 137 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 C8orf33Q9H7E9 229 aaPredicted RBP2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 SYNDIG1Q9H7V2 258 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 KCNJ16Q9NPI9 418 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 SIRT7Q9NRC8 400 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 ZNF355PQ9NSJ1 428 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 ADAMTS13Q76LX8 1427 aa2.64□□□□□ -1.99
SHCBP1-206ENST00000567698 OR6C74A6NCV1 312 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 C9JVG2 144 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 DYNC1I1O14576 645 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 TRDMT1O14717 391 aaKnown RBP2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 CHST1O43916 411 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 SERPINA5P05154 406 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 CCNB1P14635 433 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 MUC1P15941 1255 aaPredicted RBP2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 PSMC3P17980 439 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 CEACAM6P40199 344 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 NAA10P41227 235 aaPredicted RBP2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 TRDNQ13061 729 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 PRPSAP1Q14558 356 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 LY6EQ16553 131 aa2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 HNRNPA1L2Q32P51 320 aaKnown RBP2.63□□□□□ -1.99
SHCBP1-206ENST00000567698 SLC8B1Q6J4K2 584 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms