RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 FABP6P51161 128 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 HIST1H3AP68431 136 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 TMED1Q13445 227 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 PCK2Q16822 640 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 HIST2H3PS2Q5TEC6 136 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 KRT80Q6KB66 452 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 B3GLCTQ6Y288 498 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 HIST2H3AQ71DI3 136 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 MUC15Q8N387 334 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 GALNT4Q8N4A0 578 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 ZNF511Q8NB15 262 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 CPEB3Q8NE35 698 aaKnown RBP10.53□□□□□ -0.72
SF3B3-208ENST00000567250 OR1F12Q8NHA8 337 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 LILRB1Q8NHL6 650 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-208ENST00000567250 SMAP2Q8WU79 429 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-208ENST00000567250 TMEM171Q8WVE6 324 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 ZMYND19Q96E35 227 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-208ENST00000567250 POM121L2Q96KW2 1035 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 COG8Q96MW5 612 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 IL4I1Q96RQ9 567 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 MBOAT4Q96T53 435 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 APOL4Q9BPW4 351 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 CXorf56Q9H5V9 222 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 PLCE1Q9P212 2302 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 DSCAMO60469 2012 aa10.53□□□□□ -0.72
SF3B3-208ENST00000567250 NBPF19A0A087WUL8 3843 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 LOC100130705A0A1B0GUX0 176 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 E7EQL1 145 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 M0R129 80 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF593O00488 134 aaPredicted RBP10.52□□□□□ -0.73
SF3B3-208ENST00000567250 SLC16A6O15403 523 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 SYNGR3O43761 229 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 ICMTO60725 284 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 ABHD16AO95870 558 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 CCL2P13500 99 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 TTKP33981 857 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 GLRXP35754 106 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 SLC15A1P46059 708 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 RGS6P49758 472 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 NKX6-1P78426 367 aaPredicted RBP10.52□□□□□ -0.73
SF3B3-208ENST00000567250 EFNB1P98172 346 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 POU4F2Q12837 409 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 RIPK1Q13546 671 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 GGTLC2Q14390 218 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 CCDC92Q53HC0 331 aaPredicted RBP10.52□□□□□ -0.73
SF3B3-208ENST00000567250 AADACL4Q5VUY2 407 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 MEDAGQ5VYS4 303 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 DMRTA1Q5VZB9 504 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 TTC23Q5W5X9 447 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 OTPQ5XKR4 325 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 CORO6Q6QEF8 472 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 VHLLQ6RSH7 139 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 LYPD4Q6UWN0 246 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 CFAP77Q6ZQR2 320 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 MEPCEQ7L2J0 689 aaKnown RBP10.52□□□□□ -0.73
SF3B3-208ENST00000567250 DPY19L4Q7Z388 723 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 DCXRQ7Z4W1 244 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 TIGD4Q8IY51 512 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 SETD9Q8NE22 299 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 BBS1Q8NFJ9 593 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 ZNRF4Q8WWF5 429 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 NEUROG1Q92886 237 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 SPTSSAQ969W0 71 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 CNN2Q99439 309 aaKnown RBP10.52□□□□□ -0.73
SF3B3-208ENST00000567250 MNTQ99583 582 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 WDR76Q9H967 626 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 WARS2Q9UGM6 360 aaKnown RBP10.52□□□□□ -0.73
SF3B3-208ENST00000567250 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.52□□□□□ -0.73
SF3B3-208ENST00000567250 TMEM14AQ9Y6G1 99 aa10.52□□□□□ -0.73
SF3B3-208ENST00000567250 LOC100509620A0A075B734 347 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 H3BSA7 217 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 PHYHO14832 338 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 SELENOFO60613 162 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 SMPD2O60906 423 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 ATE1O95260 518 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 LCKP06239 509 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 LYNP07948 512 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 DANCRP0C864 163 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 FAM157BP0CG42 384 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 TUBG1P23258 451 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 NAA10P41227 235 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-208ENST00000567250 NUDT6P53370 316 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 SELENOVP59797 346 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 SNRPGP62308 76 aaKnown RBP10.51□□□□□ -0.73
SF3B3-208ENST00000567250 SNRPD2P62316 118 aaKnown RBP10.51□□□□□ -0.73
SF3B3-208ENST00000567250 GRB2P62993 217 aaKnown RBP10.51□□□□□ -0.73
SF3B3-208ENST00000567250 HGFACQ04756 655 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 DBPQ10586 325 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-208ENST00000567250 EIF2B1Q14232 305 aaKnown RBP10.51□□□□□ -0.73
SF3B3-208ENST00000567250 TAF13Q15543 124 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 RGS7BPQ6MZT1 257 aaPredicted RBP10.51□□□□□ -0.73
SF3B3-208ENST00000567250 TMEM154Q6P9G4 183 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 RHOUQ7L0Q8 258 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 SLC16A9Q7RTY1 509 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 DTX2Q86UW9 622 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 OTOSQ8NHW6 89 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 ABHD4Q8TB40 342 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 CYGBQ8WWM9 190 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 SLAMF6Q96DU3 332 aa10.51□□□□□ -0.73
SF3B3-208ENST00000567250 MAP6Q96JE9 813 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms