RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 C1QTNF5Q9BXJ0 243 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 PATZ1Q9HBE1 687 aaKnown RBP7.22□□□□□ -1.25
CAPN3-213ENST00000565173 MRGBPQ9NV56 204 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 ZNF69Q9UC07 566 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 IL19Q9UHD0 177 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 INSIG2Q9Y5U4 225 aa7.22□□□□□ -1.25
CAPN3-213ENST00000565173 TEX13CA0A0J9YWL9 993 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 PRSS37A4D1T9 235 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 OR6C6A6NF89 314 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 A8MXK9 166 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 TMEM178BH3BS89 294 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 NME4O00746 187 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 DOK2O60496 412 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 IFNW1P05000 195 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 DBHP09172 617 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 HKR1P10072 659 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 TNFRSF1AP19438 455 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 GSTM3P21266 225 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 GPR4P46093 362 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 HTR5AP47898 357 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 BTG1P62324 171 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 PAX2Q02962 417 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 PAX8Q06710 450 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 SCRN3Q0VDG4 424 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 HLXQ14774 488 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 ZMYND11Q15326 602 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 MAPRE2Q15555 327 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 RSPO1Q2MKA7 263 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 CCDC92Q53HC0 331 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 C8orf82Q6P1X6 216 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 ZNF730Q6ZMV8 503 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 CBLL1Q75N03 491 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 DOK3Q7L591 496 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 CPLX4Q7Z7G2 160 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 TREML1Q86YW5 311 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 KLHL36Q8N4N3 616 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 NPEPL1Q8NDH3 523 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 ITLN1Q8WWA0 313 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 LZICQ8WZA0 190 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 PTP4A1Q93096 173 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 POP5Q969H6 163 aaKnown RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 RCN3Q96D15 328 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 OR2V2Q96R30 315 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 ELAC2Q9BQ52 826 aaKnown RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 ZNF747Q9BV97 191 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 NSRP1Q9H0G5 558 aaKnown RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 NMNAT1Q9HAN9 279 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 GCM1Q9NP62 436 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 DDX28Q9NUL7 540 aaKnown RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 VSX1Q9NZR4 365 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 ARMCX1Q9P291 453 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 GRHPRQ9UBQ7 328 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 NUP50Q9UKX7 468 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 PPP1R3CQ9UQK1 317 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 SIGLEC7Q9Y286 467 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 COA3Q9Y2R0 106 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-213ENST00000565173 PPIAL4AQ9Y536 164 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 AUP1Q9Y679 476 aa7.21□□□□□ -1.26
CAPN3-213ENST00000565173 A0A1B0GWJ7 208 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 CXCR6O00574 342 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 RER1O15258 196 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 TMPRSS2O15393 492 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 KCNAB3O43448 404 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 SGCEO43556 437 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 GPANK1O95872 356 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 WNT2P09544 360 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 RAC2P15153 192 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 TNFSF4P23510 183 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 PRTN3P24158 256 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 IFNA8P32881 189 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 CD80P33681 288 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 RPL4P36578 427 aaKnown RBP7.2□□□□□ -1.26
CAPN3-213ENST00000565173 FXYD6P3P58550 94 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 LSM6P62312 80 aaKnown RBP7.2□□□□□ -1.26
CAPN3-213ENST00000565173 HIST1H3AP68431 136 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 LIPEQ05469 1076 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 AQP6Q13520 282 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 KCNMB1Q16558 191 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 IFI44LQ53G44 452 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 PRR31Q5SQ13 230 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 HIST2H3PS2Q5TEC6 136 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 FBXW12Q6X9E4 464 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 PTCHD4Q6ZW05 846 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 HIST2H3AQ71DI3 136 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 GLB1L2Q8IW92 636 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 SPICQ8N5J4 248 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 POU5F2Q8N7G0 328 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 OR1F12Q8NHA8 337 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 SLC7A13Q8TCU3 470 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 DACT3Q96B18 629 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-213ENST00000565173 RASD2Q96D21 266 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 ZNF570Q96NI8 536 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 DUX5Q96PT3 197 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 GPX7Q96SL4 187 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-213ENST00000565173 TMEM165Q9HC07 324 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 NRIP3Q9NQ35 241 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 FAM53CQ9NYF3 392 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 PLEK2Q9NYT0 353 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 ASH2LQ9UBL3 628 aa7.2□□□□□ -1.26
CAPN3-213ENST00000565173 AP3M1Q9Y2T2 418 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms