RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 GALNT9Q9HCQ5 603 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ANKRD10Q9NXR5 420 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ALKBH4Q9NXW9 302 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 NPIPA1Q9UND3 350 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 NUBP2Q9Y5Y2 271 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 A0A0C4DFX4 3053 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 A0A0B4J293 547 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 GABARAPH6UMI1 98 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 PYCARD-AS1I3L0S3 204 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 KLK10O43240 276 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ATP6V1G1O75348 118 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 OR2J2O76002 312 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 GP1BAP07359 652 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF823P16415 610 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 EGR1P18146 543 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 EIF1P41567 113 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 AP3S2P59780 193 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ADAM8P78325 824 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 RPP30P78346 268 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 HSF1Q00613 529 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 FOXF1Q12946 379 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 CAMK2DQ13557 499 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF239Q16600 458 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 PLPPR5Q32ZL2 321 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 LCN10Q6JVE6 187 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 C3orf33Q6P1S2 294 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ARSKQ6UWY0 536 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 NCCRP1Q6ZVX7 275 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ASB18Q6ZVZ8 466 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC35D2Q76EJ3 337 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 FCRLAQ7L513 359 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 HDDC2Q7Z4H3 204 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 LRRTM1Q86UE6 522 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 MAML2Q8IZL2 1156 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 TCTE3Q8IZS6 198 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 PRSS35Q8N3Z0 413 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 M1APQ8TC57 530 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC25A43Q8WUT9 341 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 MIB2Q96AX9 1013 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 HAVCR1Q96D42 359 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ZNF837Q96EG3 531 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 RNF31Q96EP0 1072 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ZFP3Q96NJ6 502 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 RASL10BQ96S79 203 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 MDFIQ99750 246 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 CMKLR1Q99788 373 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ABHD6Q9BV23 337 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 ACTR6Q9GZN1 396 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 PTGES2Q9H7Z7 377 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 NUFIP1Q9UHK0 495 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 FOXJ3Q9UPW0 622 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 VDAC3Q9Y277 283 aa6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 COA3Q9Y2R0 106 aaPredicted RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 MRPS7Q9Y2R9 242 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-209ENST00000564678 CACNA1CQ13936 2221 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 A0A087WZY1 265 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 LOC102725191A0A1B0GVB3 256 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 NAP1L6A6NFF2 107 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 A6NIN4 97 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ANXA2P2A6NMY6 339 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 C9J4A7 227 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 TXNL1O43396 289 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 KHDRBS3O75525 346 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ISG15P05161 165 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 YES1P07947 543 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ARSBP15848 533 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 DCTDP32321 178 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ART1P52961 327 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 RRAS2P62070 204 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 SNTB2Q13425 540 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 PCOLCEQ15113 449 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 WDR38Q5JTN6 314 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 THEM4Q5T1C6 240 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 HES5Q5TA89 166 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 OPN5Q6U736 354 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 RHOUQ7L0Q8 258 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 DEFB123Q8N688 67 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 FADS6Q8N9I5 356 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 SLC26A10Q8NG04 563 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 OR2M3Q8NG83 312 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 OR10G3Q8NGC4 313 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 OR52N5Q8NH56 324 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 IMMP1LQ96LU5 166 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 RBP7Q96R05 134 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 AMELYQ99218 206 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 MESP1Q9BRJ9 268 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 FSCN3Q9NQT6 498 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 DDX28Q9NUL7 540 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ING3Q9NXR8 418 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 KLHL13Q9P2N7 655 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 OR5V1Q9UGF6 321 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 STEAP1Q9UHE8 339 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 FBXO4Q9UKT5 387 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 HDGFL3Q9Y3E1 203 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 ALG5Q9Y673 324 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 FREM3P0C091 2139 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 IGHV1-45A0A0A0MS14 117 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 A0A0B4J203 849 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 A0A1W2PQ72 361 aa6.47□□□□□ -1.37
HERPUD1-209ENST00000564678 A4D1N5 150 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms