RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-223ENST00000564343 LCN2P80188 198 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 CAMK2DQ13557 499 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 FHL3Q13643 280 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 C1DQ13901 141 aaKnown RBP4.35□□□□□ -1.71
TCF4-223ENST00000564343 LIN52Q52LA3 116 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 SPRNQ5BIV9 151 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 RNASE12Q5GAN4 147 aaKnown RBP4.35□□□□□ -1.71
TCF4-223ENST00000564343 TMEM255AQ5JRV8 349 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 KLF17Q5JT82 389 aaPredicted RBP4.35□□□□□ -1.71
TCF4-223ENST00000564343 FAM69AQ5T7M9 428 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 REP15Q6BDI9 236 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 WDR88Q6ZMY6 472 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 ZNF621Q6ZSS3 439 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 H1FNTQ75WM6 255 aaPredicted RBP4.35□□□□□ -1.71
TCF4-223ENST00000564343 COMTD1Q86VU5 262 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 UEVLDQ8IX04 471 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 SKA3Q8IX90 412 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 C20orf196Q8IYI0 205 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 LRRC34Q8IZ02 419 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 TEX29Q8N6K0 151 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 MNS1Q8NEH6 495 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 SLC38A5Q8WUX1 472 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 RAB39BQ96DA2 213 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 MAELQ96JY0 434 aaKnown RBP4.35□□□□□ -1.71
TCF4-223ENST00000564343 LRR1Q96L50 414 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 HIST1H2AAQ96QV6 131 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 MMP26Q9NRE1 261 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 MED29Q9NX70 200 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 P2RX2Q9UBL9 471 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 SLC7A8Q9UHI5 535 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 BTNL2Q9UIR0 455 aa4.35□□□□□ -1.71
TCF4-223ENST00000564343 SOX21Q9Y651 276 aaPredicted RBP4.35□□□□□ -1.71
TCF4-223ENST00000564343 NOTCH1P46531 2555 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 A0A087WUJ7 227 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 IGHV1-69-2A0A0G2JMI3 117 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 CLDN25C9JDP6 229 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 LRRN3E7EW58 273 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 TRAPPC2LH3BP13 241 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 SERPINI2O75830 405 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 RAB36O95755 333 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 SERPINA5P05154 406 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 BPGMP07738 259 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 NQO1P15559 274 aaKnown RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 OMGP23515 440 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 FPR3P25089 353 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 HTR2AP28223 471 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 GTF2E2P29084 291 aaKnown RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 PRKAR1BP31321 381 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 CRISP3P54108 245 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 KLF3P57682 345 aaPredicted RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 SEC61A1P61619 476 aaKnown RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 RPS23P62266 143 aaKnown RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 GLO1Q04760 184 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 LARS2Q15031 903 aaKnown RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 TSTQ16762 297 aaKnown RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 GTDC1Q4AE62 458 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 LEG1Q6P5S2 330 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 TMEM154Q6P9G4 183 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 C6orf89Q6UWU4 347 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 TRIML2Q8N7C3 387 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 DEFB108BQ8NET1 73 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 SYNPRQ8TBG9 265 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 MGARPQ8TDB4 240 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 CCL17Q92583 94 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 VPS33AQ96AX1 596 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 SLC41A3Q96GZ6 507 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 PKNOX2Q96KN3 472 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 COG8Q96MW5 612 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 ZIM3Q96PE6 472 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 OR52E6Q96RD3 313 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 PRR25Q96S07 402 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 SORT1Q99523 831 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 SH3GL3Q99963 347 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 GAL3ST1Q99999 423 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 NUF2Q9BZD4 464 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 ULBP2Q9BZM5 246 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 DENND2DQ9H6A0 471 aaPredicted RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 HINT3Q9NQE9 182 aaKnown RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 DCAF16Q9NXF7 216 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 NKIRAS2Q9NYR9 191 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 NDUFAF4Q9P032 175 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 PDP1Q9P0J1 537 aaPredicted RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 ARMCX1Q9P291 453 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 LEF1Q9UJU2 399 aaPredicted RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 PRDM4Q9UKN5 801 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 NUP50Q9UKX7 468 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 ZNF346Q9UL40 294 aaKnown RBP4.34□□□□□ -1.71
TCF4-223ENST00000564343 POFUT2Q9Y2G5 429 aa4.34□□□□□ -1.71
TCF4-223ENST00000564343 TRAV36DV7A0A075B6V5 113 aa4.33□□□□□ -1.72
TCF4-223ENST00000564343 A0A0G2JPF8 293 aa4.33□□□□□ -1.72
TCF4-223ENST00000564343 A0A1B0GWA3 101 aa4.33□□□□□ -1.72
TCF4-223ENST00000564343 ISPDA4D126 451 aa4.33□□□□□ -1.72
TCF4-223ENST00000564343 ZNF726A6NNF4 738 aa4.33□□□□□ -1.72
TCF4-223ENST00000564343 HNRNPCL2B2RXH8 293 aa4.33□□□□□ -1.72
TCF4-223ENST00000564343 HNRNPCL3B7ZW38 293 aa4.33□□□□□ -1.72
TCF4-223ENST00000564343 RFXANKO14593 260 aa4.33□□□□□ -1.72
TCF4-223ENST00000564343 OR2T1O43869 369 aa4.33□□□□□ -1.72
TCF4-223ENST00000564343 TYROBPO43914 113 aa4.33□□□□□ -1.72
TCF4-223ENST00000564343 HNRNPCL1O60812 293 aaKnown RBP4.33□□□□□ -1.72
TCF4-223ENST00000564343 UBL3O95164 117 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms