RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ZNF433Q8N7K0 673 aaPredicted RBP11.23□□□□□ -0.61
CLK3-214ENST00000564096 GATAD2BQ8WXI9 593 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 BCL2L2Q92843 193 aaPredicted RBP11.23□□□□□ -0.61
CLK3-214ENST00000564096 SPTSSAQ969W0 71 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 BOD1Q96IK1 185 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 MAP6Q96JE9 813 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 COG8Q96MW5 612 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 MGLLQ99685 303 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 OR2H1Q9GZK4 316 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 MOB1AQ9H8S9 216 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 CENPMQ9NSP4 180 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 DDX28Q9NUL7 540 aaKnown RBP11.23□□□□□ -0.61
CLK3-214ENST00000564096 BABAM2Q9NXR7 383 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 AMDHD2Q9Y303 409 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 LRP12Q9Y561 859 aa11.23□□□□□ -0.61
CLK3-214ENST00000564096 ARPC4-TTLL3A0A0A6YYG9 625 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 SVILO95425 2214 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 PSMB1P20618 241 aaKnown RBP11.22□□□□□ -0.61
CLK3-214ENST00000564096 GNLYP22749 145 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 DCTDP32321 178 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 HTR5AP47898 357 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 FOXG1P55316 489 aaPredicted RBP11.22□□□□□ -0.61
CLK3-214ENST00000564096 OR12D2P58182 307 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 PSMA6P60900 246 aaKnown RBP11.22□□□□□ -0.61
CLK3-214ENST00000564096 HIST1H3AP68431 136 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 RAB39AQ14964 217 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 GSG1Q2KHT4 349 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 HIKESHIQ53FT3 197 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 ARMCX4Q5H9R4 360 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 SFRP5Q5T4F7 317 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 HIST2H3PS2Q5TEC6 136 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 NCCRP1Q6ZVX7 275 aaPredicted RBP11.22□□□□□ -0.61
CLK3-214ENST00000564096 HIST2H3AQ71DI3 136 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 KLBQ86Z14 1044 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 SKA3Q8IX90 412 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 RELL2Q8NC24 303 aaPredicted RBP11.22□□□□□ -0.61
CLK3-214ENST00000564096 STEAP2Q8NFT2 490 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 PRR7Q8TB68 274 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 FBXO17Q96EF6 278 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 OR5M11Q96RB7 305 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 SPENQ96T58 3664 aaKnown RBP11.22□□□□□ -0.61
CLK3-214ENST00000564096 AMELYQ99218 206 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 COQ7Q99807 217 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 ZNF649Q9BS31 505 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 ISG20L2Q9H9L3 353 aaKnown RBP11.22□□□□□ -0.61
CLK3-214ENST00000564096 ELOVL3Q9HB03 270 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 BATF3Q9NR55 127 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 SLCO1C1Q9NYB5 712 aa11.22□□□□□ -0.61
CLK3-214ENST00000564096 MRM2Q9UI43 246 aaKnown RBP11.22□□□□□ -0.61
CLK3-214ENST00000564096 DOCK7Q96N67 2140 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 IQCMA0A1B0GVH7 501 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 OR6C6A6NF89 314 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 A8MXE2 369 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 PSMD9O00233 223 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 CCRL2O00421 344 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 INMTO95050 263 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 RPP14O95059 124 aaKnown RBP11.21□□□□□ -0.61
CLK3-214ENST00000564096 ABHD16AO95870 558 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 HLA-HP01893 362 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 TFAP2AP05549 437 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 COX5BP10606 129 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 CD79BP40259 229 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 ALDH3B2P48448 385 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 TGM4P49221 684 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 GABRA6Q16445 453 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 TIMM50Q3ZCQ8 353 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 ZNF684Q5T5D7 378 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 LIPNQ5VXI9 398 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 RPL22L1Q6P5R6 122 aaKnown RBP11.21□□□□□ -0.61
CLK3-214ENST00000564096 ZNF474Q6S9Z5 364 aaPredicted RBP11.21□□□□□ -0.61
CLK3-214ENST00000564096 P2RY8Q86VZ1 359 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 ZNF843Q8N446 348 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 OR13F1Q8NGS4 319 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 OR1F12Q8NHA8 337 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 PELI1Q96FA3 418 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 CCDC120Q96HB5 630 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 OPALINQ96PE5 141 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 BBC3Q96PG8 261 aaPredicted RBP11.21□□□□□ -0.61
CLK3-214ENST00000564096 OR10A4Q9H209 315 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 SP140LQ9H930 580 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 SLC17A5Q9NRA2 495 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 JKAMPQ9P055 326 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 ERRFI1Q9UJM3 462 aaPredicted RBP11.21□□□□□ -0.61
CLK3-214ENST00000564096 SLC5A6Q9Y289 635 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 R4GMQ9 66 aa11.21□□□□□ -0.61
CLK3-214ENST00000564096 FAM208BQ5VWN6 2430 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 SHANK1Q9Y566 2161 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 ARHGAP21Q5T5U3 1957 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 OR5H1A6NKK0 313 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 PRR32B1ATL7 298 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 LOC110117498-PIK3R3F6TDL0 507 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 LRRTM2O43300 516 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 MMP7P09237 267 aaPredicted RBP11.2□□□□□ -0.62
CLK3-214ENST00000564096 CD53P19397 219 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 PSMA1P25786 263 aaKnown RBP11.2□□□□□ -0.62
CLK3-214ENST00000564096 UQCRFS1P47985 274 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 SLC6A9P48067 706 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 CX3CR1P49238 355 aa11.2□□□□□ -0.62
CLK3-214ENST00000564096 GP2P55259 537 aaKnown RBP11.2□□□□□ -0.62
CLK3-214ENST00000564096 GPR50Q13585 617 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms