RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ALKBH2Q6NS38 261 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 FAM57BQ71RH2 274 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 KCNG3Q8TAE7 436 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 PATE1Q8WXA2 126 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 KLHDC7BQ96G42 594 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 RBM24Q9BX46 236 aaKnown RBP11.45□□□□□ -0.58
COMMD4-209ENST00000564068 PPP4R1LQ9P1A2 415 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ASH2LQ9UBL3 628 aa11.45□□□□□ -0.58
COMMD4-209ENST00000564068 ZNF230Q9UIE0 474 aaPredicted RBP11.45□□□□□ -0.58
COMMD4-209ENST00000564068 NUDT21O43809 227 aaKnown RBP11.44□□□□□ -0.58
COMMD4-209ENST00000564068 FCGR2CP31995 323 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 HTRA4P83105 476 aaPredicted RBP11.44□□□□□ -0.58
COMMD4-209ENST00000564068 ACTBL2Q562R1 376 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 FCRL6Q6DN72 434 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 RGS7BPQ6MZT1 257 aaPredicted RBP11.44□□□□□ -0.58
COMMD4-209ENST00000564068 UQCC3Q6UW78 93 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 CPEB2Q7Z5Q1 589 aaKnown RBP11.44□□□□□ -0.58
COMMD4-209ENST00000564068 GLRX5Q86SX6 157 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 FAM219AQ8IW50 185 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 FAM3CQ92520 227 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 FRZBQ92765 325 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 ISOC2Q96AB3 205 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 FKRPQ9H9S5 495 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 TPRP12270 2363 aaKnown RBP11.44□□□□□ -0.58
COMMD4-209ENST00000564068 OR5K4A6NMS3 321 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 KCNAB3O43448 404 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 RAB38P57729 211 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 PJVKQ0ZLH3 352 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 UEVLDQ8IX04 471 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 RFLNBQ8N5W9 214 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 TMEM217Q8N7C4 229 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 OR56B1Q8NGI3 324 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 MFSD2BA6NFX1 497 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 A6NIZ1 184 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 OR6C76A6NM76 312 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 CX3CR1P49238 355 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 RAP1BP61224 184 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 RAP1AP62834 184 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 ARL6IP1Q15041 203 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 ACKR1Q16570 336 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 GUCA2BQ16661 112 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 TMEM52BQ4KMG9 183 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 C4orf17Q53FE4 359 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 ANKRD16Q6P6B7 361 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 Q6ZSR6 202 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 FAM24BQ8N5W8 94 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 CCL4L1Q8NHW4 92 aa11.44□□□□□ -0.58
COMMD4-209ENST00000564068 BRINP1O60477 761 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 EIF2S3P41091 472 aaKnown RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 DUSP2Q05923 314 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 PHLDA2Q53GA4 152 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 TMEM240Q5SV17 173 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 ZNF660Q6AZW8 331 aaPredicted RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 UBE3DQ7Z6J8 389 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 SLC43A2Q8N370 569 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 FGF13Q92913 245 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 LINC00615Q96LM1 132 aaPredicted RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 CMTM3Q96MX0 182 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 OCSTAMPQ9BR26 566 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 PIGQQ9BRB3 760 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 EMC6Q9BV81 110 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 MMP24Q9Y5R2 645 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 RTTNQ86VV8 2226 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 PLSCR5A0PG75 271 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 C2orf72A6NCS6 295 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 UTS2O95399 124 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 DAOP14920 347 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 TAS2R46P59540 309 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 AVL9Q8NBF6 648 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 OR10AC1Q8NH08 325 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 OR4C3Q8NH37 302 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 FBXO17Q96EF6 278 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 PTGES2Q9H7Z7 377 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 SERTAD3Q9UJW9 196 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 CABIN1Q9Y6J0 2220 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 SCN4AP35499 1836 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 CENPVL1A0A0U1RR11 272 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 MED19A0JLT2 244 aaPredicted RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 H0Y8X5 98 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 CTDSPLO15194 276 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 OGG1O15527 345 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 VSIG10L2P0DP72 767 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 RPL12P30050 165 aaKnown RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 DAP3P51398 398 aaKnown RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 SLC17A1Q14916 467 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 NHLRC3Q5JS37 347 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 OGFOD3Q6PK18 319 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 FAM160A2Q8N612 972 aaPredicted RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 CLCC1Q96S66 551 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 A0A0B4J2E0 115 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 A0A1B0GX12 115 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 CNOT4O95628 575 aaKnown RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 NR2C1P13056 603 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 HNRNPA2B1P22626 353 aaKnown RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 CDKN2AP42771 156 aaKnown RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 HOXA1P49639 335 aaPredicted RBP11.43□□□□□ -0.58
COMMD4-209ENST00000564068 WDR38Q5JTN6 314 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 OVCH2Q7RTZ1 564 aa11.43□□□□□ -0.58
COMMD4-209ENST00000564068 NIPSNAP3BQ9BS92 247 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms