RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 HSD17B8Q92506 261 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 ISOC1Q96CN7 298 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 OPN3Q9H1Y3 402 aaPredicted RBP8.9□□□□□ -0.98
SMG1-208ENST00000563448 OR51E2Q9H255 320 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 Q9UFV3 132 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 FBXL3Q9UKT7 428 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 COL6A6A6NMZ7 2263 aa8.9□□□□□ -0.98
SMG1-208ENST00000563448 ZNF878C9JN71 531 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 PLPP2O43688 288 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 ZNF254O75437 659 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 FARS2O95363 451 aaKnown RBP8.9□□□□□ -0.99
SMG1-208ENST00000563448 PNPP00491 289 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 MMP7P09237 267 aaPredicted RBP8.9□□□□□ -0.99
SMG1-208ENST00000563448 H2BFMP0C1H6 154 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 CD8BP10966 210 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 RIDAP52758 137 aaKnown RBP8.9□□□□□ -0.99
SMG1-208ENST00000563448 TMBIM6P55061 237 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 SH3BGRP55822 239 aaPredicted RBP8.9□□□□□ -0.99
SMG1-208ENST00000563448 RPS25P62851 125 aaKnown RBP8.9□□□□□ -0.99
SMG1-208ENST00000563448 GPR50Q13585 617 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 CDK5R1Q15078 307 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 CCDC58Q4VC31 144 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 RPL22L1Q6P5R6 122 aaKnown RBP8.9□□□□□ -0.99
SMG1-208ENST00000563448 RHOUQ7L0Q8 258 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 SYT9Q86SS6 491 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 RPS4Y2Q8TD47 263 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 BCL2L2Q92843 193 aaPredicted RBP8.9□□□□□ -0.99
SMG1-208ENST00000563448 RPL3LQ92901 407 aaKnown RBP8.9□□□□□ -0.99
SMG1-208ENST00000563448 DGCR14Q96DF8 476 aaKnown RBP8.9□□□□□ -0.99
SMG1-208ENST00000563448 PGLYRP3Q96LB9 341 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 DMRTA2Q96SC8 542 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 SFXN3Q9BWM7 321 aa8.9□□□□□ -0.99
SMG1-208ENST00000563448 RSL24D1Q9UHA3 163 aaKnown RBP8.9□□□□□ -0.99
SMG1-208ENST00000563448 ZNF503-AS2A6NEH8 195 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 GPX5O75715 221 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 GABARAPO95166 117 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 PAX7P23759 505 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 CRYBB2P43320 205 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 PSG4Q00888 419 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 MFGE8Q08431 387 aaPredicted RBP8.89□□□□□ -0.99
SMG1-208ENST00000563448 MRPL28Q13084 256 aaKnown RBP8.89□□□□□ -0.99
SMG1-208ENST00000563448 ALKBH1Q13686 389 aaKnown RBP8.89□□□□□ -0.99
SMG1-208ENST00000563448 CTF1Q16619 201 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 ELFN2Q5R3F8 820 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 FDX2Q6P4F2 183 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 ANKRD16Q6P6B7 361 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 ARL9Q6T311 187 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.89□□□□□ -0.99
SMG1-208ENST00000563448 GABRG1Q8N1C3 465 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 PRSS35Q8N3Z0 413 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 ZNF433Q8N7K0 673 aaPredicted RBP8.89□□□□□ -0.99
SMG1-208ENST00000563448 ZNF420Q8TAQ5 688 aaPredicted RBP8.89□□□□□ -0.99
SMG1-208ENST00000563448 C12orf43Q96C57 262 aaKnown RBP8.89□□□□□ -0.99
SMG1-208ENST00000563448 DOK1Q99704 481 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 WACQ9BTA9 647 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 KCNN2Q9H2S1 579 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 FRRS1LQ9P0K9 344 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 SLC5A6Q9Y289 635 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 NBEAQ8NFP9 2946 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 CACNA1BQ00975 2339 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 PCNX1Q96RV3 2341 aa8.89□□□□□ -0.99
SMG1-208ENST00000563448 TRGV8A0A0C4DH27 118 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 TRBV2A0A0J9YWF9 115 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 E9PLN8 166 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 H3BMQ9 156 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 ATXN7O15265 892 aaPredicted RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 SGCEO43556 437 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 AIREO43918 545 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 LYZL6O75951 148 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 COX5AP20674 150 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 GABRA5P31644 462 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 DCTDP32321 178 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 TGFBR1P36897 503 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 CA7P43166 264 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 GDI2P50395 445 aaKnown RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 PCBD1P61457 104 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 LSM3P62310 102 aaKnown RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 SLC3A1Q07837 685 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 SCRN3Q0VDG4 424 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 TSC22D1Q15714 1073 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 GABRA6Q16445 453 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 RSPO1Q2MKA7 263 aaPredicted RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 HIKESHIQ53FT3 197 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 ZNF774Q6NX45 483 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 ZNF474Q6S9Z5 364 aaPredicted RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 OR2G2Q8NGZ5 317 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 AKR7LQ8NHP1 331 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 HAVCR2Q8TDQ0 301 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 TMEM203Q969S6 136 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 PPP1R14AQ96A00 147 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 SMIM19Q96E16 107 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 TRMT61AQ96FX7 289 aaKnown RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 ATF6BQ99941 703 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 VKORC1Q9BQB6 163 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 OR2H1Q9GZK4 316 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 WNT5BQ9H1J7 359 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 DDX28Q9NUL7 540 aaKnown RBP8.88□□□□□ -0.99
SMG1-208ENST00000563448 PLEK2Q9NYT0 353 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 STUB1Q9UNE7 303 aa8.88□□□□□ -0.99
SMG1-208ENST00000563448 MEMO1Q9Y316 297 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms