RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 NOX4Q9NPH5 578 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 PNRC2Q9NPJ4 139 aaKnown RBP15.91■□□□□ 0.14
COMMD4-208ENST00000563220 GTF2A1LQ9UNN4 478 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 EMC9Q9Y3B6 208 aa15.91■□□□□ 0.14
COMMD4-208ENST00000563220 TRBV5-5A0A0J9YX44 114 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 IQCMA0A1B0GVH7 501 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 ZNF724A8MTY0 619 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 K7ENP7 123 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 MRPS34P82930 218 aaKnown RBP15.9■□□□□ 0.14
COMMD4-208ENST00000563220 TSPO2Q5TGU0 170 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 INO80CQ6PI98 192 aaPredicted RBP15.9■□□□□ 0.14
COMMD4-208ENST00000563220 SYT9Q86SS6 491 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 OR51A4Q8NGJ6 313 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 CPT1CQ8TCG5 803 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 COMMD4Q9H0A8 199 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 RNF122Q9H9V4 155 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 GPR35Q9HC97 309 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 SMURF1Q9HCE7 757 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 G6PC2Q9NQR9 355 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 EMC3Q9P0I2 261 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 DKK4Q9UBT3 224 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 PEX16Q9Y5Y5 336 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 MGAQ8IWI9 3026 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 DMXL2Q8TDJ6 3036 aa15.9■□□□□ 0.14
COMMD4-208ENST00000563220 TMEM269A0A1B0GVZ9 245 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 H3BSH0 61 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 BOLA2-SMG1P6H3BVE0 249 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 IGHV3-9P01782 118 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 MYL9P24844 172 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 RNPS1Q15287 305 aaKnown RBP15.89■□□□□ 0.13
COMMD4-208ENST00000563220 Q499Y3 187 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 RIPPLY2Q5TAB7 128 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 PHYHIPQ92561 330 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 DERL3Q96Q80 235 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 PRDM14Q9GZV8 571 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 CRNNQ9UBG3 495 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-208ENST00000563220 ACACAQ13085 2346 aa15.89■□□□□ 0.13
COMMD4-208ENST00000563220 TRAV1-2A0A0B4J238 106 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 AQP7O14520 342 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 ARL6IP5O75915 188 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 YES1P07947 543 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 S100A5P33763 92 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 SOX2P48431 317 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 OR10A3P58181 314 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 ZNF45Q02386 682 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 ZNF181Q2M3W8 571 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 CEACAM16Q2WEN9 425 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 FAM27BQ5VT28 67 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 TPRA1Q86W33 373 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 B3GAT2Q9NPZ5 323 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 PLSCR2Q9NRY7 297 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 SLC7A10Q9NS82 523 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 TMEM38BQ9NVV0 291 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 PARPBPQ9NWS1 579 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 OR52A1Q9UKL2 312 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 A0A0G2JK05 382 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 ZNF878C9JN71 531 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 LOC110117498-PIK3R3F6TDL0 507 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 MKRN2OSH3BPM6 223 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 DOK2O60496 412 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 UPK1BO75841 260 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 DCTDP32321 178 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 ETV6P41212 452 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 MMP16P51512 607 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 HSD17B12Q53GQ0 312 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 CEP78Q5JTW2 689 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 RHOUQ7L0Q8 258 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 NUFIP2Q7Z417 695 aaKnown RBP15.88■□□□□ 0.13
COMMD4-208ENST00000563220 GPR148Q8TDV2 347 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 FBXO17Q96EF6 278 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 ABHD17AQ96GS6 310 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 ATF6BQ99941 703 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 SLCO5A1Q9H2Y9 848 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 SP140LQ9H930 580 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 BRD7Q9NPI1 651 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 FAM206AQ9NX38 181 aa15.88■□□□□ 0.13
COMMD4-208ENST00000563220 SLC22A20A6NK97 555 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 RRP8O43159 456 aaKnown RBP15.87■□□□□ 0.13
COMMD4-208ENST00000563220 SRMP19623 302 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 NPR2P20594 1047 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 HIST1H3AP68431 136 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 TBR1Q16650 682 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 PLEKHN1Q494U1 663 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-208ENST00000563220 HIST2H3PS2Q5TEC6 136 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 HIST2H3AQ71DI3 136 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 ADGRE4PQ86SQ3 457 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 MCEMP1Q8IX19 187 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 FOXB1Q99853 325 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 LINC00470Q9BZP3 86 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 LHX6Q9UPM6 363 aa15.87■□□□□ 0.13
COMMD4-208ENST00000563220 ANKRD61A6NGH8 418 aa15.86■□□□□ 0.13
COMMD4-208ENST00000563220 RGS5O15539 181 aa15.86■□□□□ 0.13
COMMD4-208ENST00000563220 B4GALT1P15291 398 aa15.86■□□□□ 0.13
COMMD4-208ENST00000563220 TNFSF8P32971 234 aa15.86■□□□□ 0.13
COMMD4-208ENST00000563220 CCDC92Q53HC0 331 aaPredicted RBP15.86■□□□□ 0.13
COMMD4-208ENST00000563220 ZNF544Q6NX49 715 aa15.86■□□□□ 0.13
COMMD4-208ENST00000563220 KLHL24Q6TFL4 600 aa15.86■□□□□ 0.13
COMMD4-208ENST00000563220 CCDC190Q86UF4 302 aa15.86■□□□□ 0.13
COMMD4-208ENST00000563220 GJC3Q8NFK1 279 aa15.86■□□□□ 0.13
COMMD4-208ENST00000563220 MIXL1Q9H2W2 232 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms