RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 GGNBP1Q5YKI7 109 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 SUSD6Q92537 303 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 MOAP1Q96BY2 351 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 MUCL1Q96DR8 90 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 INSM2Q96T92 566 aaPredicted RBP16.82■□□□□ 0.28
RAB40C-206ENST00000561781 RPP25Q9BUL9 199 aaKnown RBP16.82■□□□□ 0.28
RAB40C-206ENST00000561781 CUTCQ9NTM9 273 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 TTC28Q96AY4 2481 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 MEIS3P1A6NDR6 274 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 PRAMEF26H0Y7S4 382 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 SOX15O60248 233 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 C1orf105O95561 183 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 WNT11O96014 354 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 IL2RAP01589 272 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 HMGN2P05204 90 aaKnown RBP16.82■□□□□ 0.28
RAB40C-206ENST00000561781 SLC2A5P22732 501 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 BSGP35613 385 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 STAC2Q6ZMT1 411 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 Q6ZRG5 221 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 BIVMQ86UB2 503 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 ARL14Q8N4G2 192 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 RNF126Q9BV68 326 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 SGPP1Q9BX95 441 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 NMES1Q9C002 83 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 ACTR3CQ9C0K3 210 aaPredicted RBP16.82■□□□□ 0.28
RAB40C-206ENST00000561781 ZNF281Q9Y2X9 895 aa16.82■□□□□ 0.28
RAB40C-206ENST00000561781 LOC100509620A0A075B734 347 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 SYT7O43581 403 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 SLC9A5Q14940 896 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 AGERQ15109 404 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 AMZ1Q400G9 498 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 C9orf64Q5T6V5 341 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 THSD4Q6ZMP0 1018 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 RTL10Q7L3V2 364 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 SLC25A42Q86VD7 318 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 SLC35F3Q8IY50 421 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 PRSS58Q8IYP2 241 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 RSPRY1Q96DX4 576 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 LRRC3BQ96PB8 259 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 STACQ99469 402 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 TAF9BQ9HBM6 251 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 CDV3Q9UKY7 258 aaKnown RBP16.81■□□□□ 0.28
RAB40C-206ENST00000561781 TMEM269A0A1B0GVZ9 245 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 C5orf51A6NDU8 294 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 TMEM235A6NFC5 223 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 CTAG2O75638 210 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 TSPAN15O95858 294 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 GUK1Q16774 197 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 TMEM35AQ53FP2 167 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 SLC22A25Q6T423 547 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 GKN2Q86XP6 184 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 CD300LFQ8TDQ1 290 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 GPX8Q8TED1 209 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 WFIKKN2Q8TEU8 576 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 HPSE2Q8WWQ2 592 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 C16orf58Q96GQ5 468 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 CD180Q99467 661 aa16.81■□□□□ 0.28
RAB40C-206ENST00000561781 SIDT1Q9NXL6 827 aaKnown RBP16.81■□□□□ 0.28
RAB40C-206ENST00000561781 TCF20Q9UGU0 1960 aaKnown RBP16.8■□□□□ 0.28
RAB40C-206ENST00000561781 TRAV18A0A075B6X5 111 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 RIIAD1A6NNX1 92 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 C2CD4DB7Z1M9 353 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 TMPRSS11DO60235 418 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 OR2T7P0C7T2 308 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 MAKP20794 623 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 IGFALSP35858 605 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 SNCAP37840 140 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 PSMB10P40306 273 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 CX3CR1P49238 355 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 SMAD4Q13485 552 aaKnown RBP16.8■□□□□ 0.28
RAB40C-206ENST00000561781 COL9A2Q14055 689 aaPredicted RBP16.8■□□□□ 0.28
RAB40C-206ENST00000561781 CRMP1Q14194 572 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 OR2T2Q6IF00 324 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 OR13C8Q8NGS7 320 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 OR2T27Q8NH04 317 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 RNASEH2CQ8TDP1 164 aaKnown RBP16.8■□□□□ 0.28
RAB40C-206ENST00000561781 FGF14Q92915 247 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 HIST1H2BLQ99880 126 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 SRMSQ9H3Y6 488 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 KCNJ16Q9NPI9 418 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 B4GALT6Q9UBX8 382 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 GNG8Q9UK08 70 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 MMP24Q9Y5R2 645 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 A0A087WZY1 265 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 M0QZK8 103 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 TAAR5O14804 337 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 GGCTO75223 188 aaKnown RBP16.8■□□□□ 0.28
RAB40C-206ENST00000561781 AIFM1O95831 613 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 GZMBP10144 247 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 RAB6AP20340 208 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 IL13RA1P78552 427 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 FAM78AQ5JUQ0 283 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 AQP10Q96PS8 301 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 GPR174Q9BXC1 333 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 C20orf141Q9NUB4 165 aa16.8■□□□□ 0.28
RAB40C-206ENST00000561781 MRPS33Q9Y291 106 aaKnown RBP16.8■□□□□ 0.28
RAB40C-206ENST00000561781 QDPRP09417 244 aa16.79■□□□□ 0.28
RAB40C-206ENST00000561781 NCBP2P52298 156 aaKnown RBP eCLIP16.79■□□□□ 0.28
RAB40C-206ENST00000561781 PARM1Q6UWI2 310 aa16.79■□□□□ 0.28
RAB40C-206ENST00000561781 GDPD4Q6W3E5 623 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms