RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	VLDLR	P98155	873 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	CDK6	Q00534	326 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	NPRL3	Q12980	569 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	FADD	Q13158	208 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	SCARB2	Q14108	478 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	OR1Q1	Q15612	314 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	ZSWIM7	Q19AV6	140 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	LRIF1	Q5T3J3	769 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	CYB5R2	Q6BCY4	276 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	REEP3	Q6NUK4	255 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	C6orf89	Q6UWU4	347 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	H1FNT	Q75WM6	255 aa	Predicted RBP	6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	MDP1	Q86V88	176 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	FAM185A	Q8N0U4	392 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	TMEM123	Q8N131	208 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	GPR137C	Q8N3F9	429 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	C10orf53	Q8N6V4	93 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	SMYD1	Q8NB12	490 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	SPATA3	Q8NHX4	192 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	LRRC8C	Q8TDW0	803 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	RAB40A	Q8WXH6	277 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	C7orf26	Q96N11	449 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	OXGR1	Q96P68	337 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	OR2M2	Q96R28	347 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	KCNS3	Q9BQ31	491 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	KATNB1	Q9BVA0	655 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	BEX2	Q9BXY8	128 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	LINC00470	Q9BZP3	86 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	RAD21L1	Q9H4I0	556 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	NOX3	Q9HBY0	568 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	MED29	Q9NX70	200 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	CRNN	Q9UBG3	495 aa	Predicted RBP	6.05	□□□□□ -1.44
MARK3-223	ENST00000561071	MALRD1	Q5VYJ5	2156 aa		6.05	□□□□□ -1.44
MARK3-223	ENST00000561071		A0A087WUJ7	227 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	IGLV5-39	A0A0G2JS06	123 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	LRP5L	A4QPB2	252 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	OR6C65	A6NJZ3	312 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	LYNX1	G3V0Z9	82 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	hCG_2039718	K7EN88	272 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	AIM2	O14862	343 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	PHF1	O43189	567 aa	Predicted RBP	6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	ERLIN1	O75477	346 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	TGDS	O95455	350 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	IL1A	P01583	271 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	BGLAP	P02818	100 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	OPN1SW	P03999	348 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	IGFBP1	P08833	259 aa	Predicted RBP	6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	PATE4	P0C8F1	98 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	LYNX1	P0DP58	116 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	CD79A	P11912	226 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	ETS2	P15036	469 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	NQO1	P15559	274 aa	Known RBP	6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	PDLIM4	P50479	330 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	RGS8	P57771	180 aa	Predicted RBP	6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	VAMP2	P63027	116 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	PMS2P3	Q13401	168 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	CAMK2D	Q13557	499 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	SELPLG	Q14242	412 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	DUSP7	Q16829	419 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	IQCC	Q4KMZ1	466 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	TTMP	Q5BVD1	217 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	FAM69A	Q5T7M9	428 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	AGBL2	Q5U5Z8	902 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	PODNL1	Q6PEZ8	512 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	ULK3	Q6PHR2	472 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	DHRS4L2	Q6PKH6	230 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	DLEU7	Q6UYE1	221 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	NHLRC1	Q6VVB1	395 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	COLCA1	Q6ZS62	124 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	SPATA21	Q7Z572	469 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	PTOV1	Q86YD1	416 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	RBM45	Q8IUH3	476 aa	Known RBP	6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	C20orf196	Q8IYI0	205 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	CDK20	Q8IZL9	346 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	SVOPL	Q8N434	492 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	LSMEM1	Q8N8F7	131 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	DNAAF1	Q8NEP3	725 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	MAGEE2	Q8TD90	523 aa	Predicted RBP	6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	PROX1	Q92786	737 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	SLC38A4	Q969I6	547 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	SLC47A1	Q96FL8	570 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	DOK1	Q99704	481 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	CCDC28B	Q9BUN5	200 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	PRDM4	Q9UKN5	801 aa		6.04	□□□□□ -1.44
MARK3-223	ENST00000561071	IGHV2OR16-5	A0A0B4J2B6	119 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071		A0A0B4J2E0	115 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	LOC102725191	A0A1B0GVB3	256 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071		A0A1B0GX12	115 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	CPSF4L	A6NMK7	179 aa	Known RBP	6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	EVPLL	A8MZ36	301 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	C11orf98	E9PRG8	122 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	RPL36A-HNRNPH2	H7BZ11	118 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071		M0QX08	132 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	PLPP3	O14495	311 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	OR2T1	O43869	369 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	LMX1B	O60663	402 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	MFN2	O95140	757 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	TGFA	P01135	160 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	IFNA2	P01563	188 aa		6.03	□□□□□ -1.44
MARK3-223	ENST00000561071	IGKV3-15	P01624	115 aa		6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms