RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 TRIP10Q15642 601 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 EFNB3Q15768 340 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 ADIPOQQ15848 244 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 SWI5Q1ZZU3 235 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 RSPO1Q2MKA7 263 aaPredicted RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 ELFN2Q5R3F8 820 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 LPCAT4Q643R3 524 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 C11orf71Q6IPW1 123 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 UNQ6126/PRO20091Q6UXV3 157 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 MEPCEQ7L2J0 689 aaKnown RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 SHFQ7M4L6 423 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 PAQR4Q8N4S7 273 aaPredicted RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 OR6K6Q8NGW6 343 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 OR2AJ1Q8NGZ0 328 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 OR1F12Q8NHA8 337 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 TMEM171Q8WVE6 324 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 NRGNQ92686 78 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 MAP6Q96JE9 813 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 MBOAT4Q96T53 435 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 TRAF4Q9BUZ4 470 aaPredicted RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 CDADC1Q9BWV3 514 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 BCL2L14Q9BZR8 327 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 OR51V1Q9H2C8 321 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 WDR76Q9H967 626 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 UBTD1Q9HAC8 227 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 RNPEPL1Q9HAU8 725 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 PNRC2Q9NPJ4 139 aaKnown RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 CA10Q9NS85 328 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 DDX28Q9NUL7 540 aaKnown RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 TBCCD1Q9NVR7 557 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 BEX4Q9NWD9 120 aaPredicted RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 FAM118AQ9NWS6 357 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 SMPD3Q9NY59 655 aaPredicted RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 PLEK2Q9NYT0 353 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 GDF2Q9UK05 429 aaPredicted RBP8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 POU2F3Q9UKI9 436 aa8.31□□□□□ -1.08
RABGGTA-221ENST00000561055 LOC100130705A0A1B0GUX0 176 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 TVP23AA6NH52 213 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 SLC22A31A6NKX4 558 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 H0YJX3 145 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 ZNF593O00488 134 aaPredicted RBP8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 SOD3P08294 240 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 PSKH1P11801 424 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 GABRB1P18505 474 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 DNASE1P24855 282 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 PEX2P28328 305 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 THBS4P35443 961 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 WNT5AP41221 380 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 HTR5AP47898 357 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 RPS23P62266 143 aaKnown RBP8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 GALK2Q01415 458 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 SNTB2Q13425 540 aaKnown RBP8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 APOFQ13790 326 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 OCLNQ16625 522 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 MST1LQ2TV78 715 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 ZIK1Q3SY52 487 aaPredicted RBP8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 LCN1P1Q5VSP4 162 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 AGAP6Q5VW22 663 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 OTPQ5XKR4 325 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 CORO6Q6QEF8 472 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 ARL9Q6T311 187 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 LYPD4Q6UWN0 246 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 CFAP77Q6ZQR2 320 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 COLCA1Q6ZS62 124 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 CDH24Q86UP0 819 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 LINC00346Q8IVM7 164 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 GID4Q8IVV7 300 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 FBXL14Q8N1E6 418 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 MUC15Q8N387 334 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 ZNF454Q8N9F8 522 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 BBS1Q8NFJ9 593 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 OR10S1Q8NGN2 331 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 OTOSQ8NHW6 89 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 ST7LQ8TDW4 575 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 INTS14Q96SY0 518 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 ATF6BQ99941 703 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 YIPF3Q9GZM5 350 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 ELOVL3Q9HB03 270 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 CDH20Q9HBT6 801 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 CBLN4Q9NTU7 201 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 ZNF701Q9NV72 531 aaPredicted RBP8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 H2AFY2Q9P0M6 372 aaPredicted RBP8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 NKX1-2Q9UD57 310 aaPredicted RBP8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 FBXO9Q9UK97 447 aaPredicted RBP8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 POLR1DQ9Y2S0 133 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 TANC2Q9HCD6 1990 aa8.3□□□□□ -1.08
RABGGTA-221ENST00000561055 CSMD1Q96PZ7 3565 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 IGLV3-9A0A075B6K5 115 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 TMEM129A0AVI4 362 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 C5orf49A4QMS7 147 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 B9A039 149 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 H3BSA7 217 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 MPZL2O60487 215 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 SMPD2O60906 423 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 CCL2P13500 99 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 ZNF250P15622 560 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 SERPINF1P36955 418 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 RPS27P42677 84 aaKnown RBP8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 RGS6P49758 472 aa8.29□□□□□ -1.08
RABGGTA-221ENST00000561055 FABP6P51161 128 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 198.4 ms