RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 FKBP14Q9NWM8 211 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 PROCRQ9UNN8 238 aa10.33□□□□□ -0.76
LDLR-212ENST00000560467 ANK3Q12955 4377 aaKnown RBP10.32□□□□□ -0.76
LDLR-212ENST00000560467 IGLV1-36A0A0B4J1U3 117 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 CCDC182A6NF36 153 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 TVP23AA6NH52 213 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 NOL3O60936 208 aaKnown RBP10.32□□□□□ -0.76
LDLR-212ENST00000560467 APOL3O95236 402 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 MT-ND2P03891 347 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 MT-ND5P03915 603 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 KRT8P05787 483 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 OR8G3PP0DMU2 310 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 MSR1P21757 451 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 C21orf33P30042 268 aaPredicted RBP10.32□□□□□ -0.76
LDLR-212ENST00000560467 UGT2B10P36537 528 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 PTH2RP49190 550 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 ROR2Q01974 943 aaKnown RBP10.32□□□□□ -0.76
LDLR-212ENST00000560467 EMX1Q04741 257 aaPredicted RBP10.32□□□□□ -0.76
LDLR-212ENST00000560467 FMODQ06828 376 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 MRPL28Q13084 256 aaKnown RBP10.32□□□□□ -0.76
LDLR-212ENST00000560467 MED22Q15528 200 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 TAF13Q15543 124 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 FBXW9Q5XUX1 488 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 LRFN4Q6PJG9 635 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 SLC25A47Q6Q0C1 308 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 B3GLCTQ6Y288 498 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 C20orf204Q6ZNR8 217 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 C22orf34Q6ZV56 151 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 GPR141Q7Z602 305 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 DPPA2Q7Z7J5 298 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 LHFPL3Q86UP9 236 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 SPATA3Q8NHX4 192 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 THEM6Q8WUY1 208 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 WACQ9BTA9 647 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 JAM3Q9BX67 310 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 MROQ9BYG7 248 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 NELFAQ9H3P2 528 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 SIAEQ9HAT2 523 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 ADGRL4Q9HBW9 690 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 GPR35Q9HC97 309 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 NDUFA13Q9P0J0 144 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 CAB39Q9Y376 341 aaPredicted RBP10.32□□□□□ -0.76
LDLR-212ENST00000560467 PCNX3Q9H6A9 2034 aa10.32□□□□□ -0.76
LDLR-212ENST00000560467 USF3Q68DE3 2245 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 TMEM129A0AVI4 362 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 ZNF99A8MXY4 864 aaPredicted RBP10.31□□□□□ -0.76
LDLR-212ENST00000560467 DCTN6O00399 190 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 UPK3AO75631 287 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 IGHA1P01876 353 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 HSMCR30P0CW71 290 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 PSMB9P28065 219 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 KIR2DL2P43627 348 aaPredicted RBP10.31□□□□□ -0.76
LDLR-212ENST00000560467 OR3A2P47893 321 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 GBX2P52951 348 aaPredicted RBP10.31□□□□□ -0.76
LDLR-212ENST00000560467 LSM6P62312 80 aaKnown RBP10.31□□□□□ -0.76
LDLR-212ENST00000560467 MRPS34P82930 218 aaKnown RBP10.31□□□□□ -0.76
LDLR-212ENST00000560467 EGR3Q06889 387 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 PIGFQ07326 219 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 FAPQ12884 760 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 EIF2B1Q14232 305 aaKnown RBP10.31□□□□□ -0.76
LDLR-212ENST00000560467 GALEQ14376 348 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 SPHARQ15513 63 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 TBCEQ15813 527 aaPredicted RBP10.31□□□□□ -0.76
LDLR-212ENST00000560467 CEACAM16Q2WEN9 425 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 NRN1LQ496H8 165 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 TEX30Q5JUR7 227 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 BEND4Q6ZU67 534 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 ZNF367Q7RTV3 350 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 CCDC36Q8IYA8 594 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 GJC3Q8NFK1 279 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 SLC26A10Q8NG04 563 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 OR52N1Q8NH53 320 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 NANOS1Q8WY41 292 aaKnown RBP10.31□□□□□ -0.76
LDLR-212ENST00000560467 KISS1RQ969F8 398 aaPredicted RBP10.31□□□□□ -0.76
LDLR-212ENST00000560467 TBX5Q99593 518 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 ALG8Q9BVK2 526 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 GSX2Q9BZM3 304 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 ACOT13Q9NPJ3 140 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 PAK1IP1Q9NWT1 392 aaPredicted RBP10.31□□□□□ -0.76
LDLR-212ENST00000560467 ERVK13-1Q9NX77 482 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 IKZF2Q9UKS7 526 aa10.31□□□□□ -0.76
LDLR-212ENST00000560467 RTTNQ86VV8 2226 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 A0A1W2PQL4 384 aaPredicted RBP10.3□□□□□ -0.76
LDLR-212ENST00000560467 CIB4A0PJX0 185 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 RPL36A-HNRNPH2H7BZ11 118 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 J3QLW9 94 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 SELENOFO60613 162 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 SULT1C4O75897 302 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 CGAP01215 116 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 IGHV3-9P01782 118 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 APOC1P02654 83 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 ZNF19P17023 458 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 MPGP29372 298 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 ZNF133P52736 654 aaPredicted RBP10.3□□□□□ -0.76
LDLR-212ENST00000560467 WNT4P56705 351 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 TAS2R43P59537 309 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 KRTAP1-1Q07627 177 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 SCRN3Q0VDG4 424 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 BLMHQ13867 455 aa10.3□□□□□ -0.76
LDLR-212ENST00000560467 P2RY6Q15077 328 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms